Trematomus bernacchii (emerald rockcod): 117491751
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Entry
117491751 CDS
T09643
Symbol
lrrc4.2
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat-containing protein 4.2
KO
K16351
netrin-G2 ligand
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117491751 (lrrc4.2)
BRITE hierarchy
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
V-set
LRR_9
ig
LRRNT
Ig_2
Sp38
Motif
Other DBs
NCBI-GeneID:
117491751
NCBI-ProteinID:
XP_033997732
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MSPLGQVRVQPTWKAALLAVLSLLPALSMCQSTGPALGSANPQNCPGVCSCTNQLSKVVC
TRRGLVRVPPNIPPNTRYLNLMENSIETIQADTFRHLHHLEVLQLGRNAIRRIEVGAFSG
LTSLNTLELFDNRLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGEL
RKLEYISDGAFEGLQNLKYLNLGMCNLREXPNLLPLLGLEELEISENXFPEMKPGAFRGL
XNLRKLWIMNSDITTIERNAFDDITDLVELNLAHNNLSSLPHNLFTPXQYLVELHLHHNP
WRVTCDVVWLSWWLREYIPTNSTCCGRCHTPVHMRGRYLVEVDQTTFQCSAPFILDAPRD
LNISAARVAELKCRTAAMSSVRWLLPNGTVLSHGSAHPRISVLNDGTLNFSNVLPSDTGV
YTCMVSNMAGNSNASAYLNVSNAELNTSNLSYFTTVTVEVLEPTVEETPKPKPTIPASPS
GFQPVFISTPTVLFQNTPTPRQVSIVTPRVPSGPAASLDEVMKTTKIIIGCFVAVTLLAA
AMLIAFYKLRKRHQQRSTGVAAARTIEIIQMEEEVPPVPPPTSGSSGSDDTVLVLPTLVE
HNSNTFKPGYVSSSSSARQGGYGAHWTQNNSLHRSVRQHHSHISTXADPYVIKTTHGKEK
VQETQI
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgagtcctttgggccaggttagagtgcagcctacctggaaagcagccctgctcgccgtg
ctctctctgcttcctgctctcagtatgtgccagtccacaggccctgcgttgggctcggct
aacccacagaactgtccaggtgtgtgctcctgcactaaccagctcagcaaggtggtgtgc
acccgccgaggcctggttagggttcccccgaacatcccacccaacaccaggtaccttaac
ctgatggaaaacagcatcgagaccatacaggcagacaccttcaggcacctgcatcacctg
gaggtactgcagttgggcagaaatgctatcagacggattgaagttggggccttcagtgga
ttgaccagcctcaataccctggagctgttcgacaacagactgacagtcatacccagtgga
gcttttgagtacctgtcaaagttgagagagctgtggcttagaaacaatcccattgagagc
atcccctcttatgccttcaaccgtgtaccctccctcatgagactggacttgggagaactg
agaaagttggagtacatctctgatggagcatttgagggccttcagaacctcaagtatctc
aacttggggatgtgcaacctgagggagnttcctaatcttttgccactgttggggttggag
gagctggaaatatcagagaatnttttccctgaaatgaagcccggggccttccgtggtctt
naaaatctacgtaaattgtggattatgaactctgacatcactactattgagagaaatgca
tttgatgacattacagacttggttgagctgaatttagcccataataacctgtcgtccctc
ccccacaacctcttcacacctntacagtacctggtggagctccacctgcaccacaaccca
tggcgagtgacctgtgatgtagtgtggctctcctggtggctcagagaatacattcccaca
aactccacctgttgtggacgttgccacaccccggttcacatgaggggacgatacctggtg
gaagttgatcagaccacctttcagtgttcagcaccattcattcttgatgctcctagagat
ctgaacatctcggcagcgagggtggccgaactgaagtgtcgcacagctgccatgagctca
gtccgatggcttctgcccaatgggactgtattgagccatggctcagctcacccacggata
tctgtccttaacgacggaacactgaacttctccaacgttctcccttcagacacaggcgtg
tacacctgcatggtgagcaacatggcaggaaactccaatgcctcagcatacctaaacgtc
agcaatgctgaactcaacacatctaatctgtcgtattttaccaccgtgacggtggaagtt
ttggagcccacagtggaggagaccccaaaacctaaacctactatccctgcctcgccctct
ggctttcagcctgtcttcatctctacacctaccgtgctgttccaaaacactccaactcca
aggcaggtgtcaatcgtcactcccagagtccctagtgggccagccgccagcttggatgag
gtgatgaaaaccacaaaaatcatcatcggctgctttgttgctgttacgttactggcagcc
gccatgttgatagcattctataagttgcgtaagcggcatcaacagaggagcactggtgtg
gcagcagcaaggaccatagaaatcatacagatggaggaggaagttcctcctgttccgccc
cccacatccggatctagtggctctgatgacacagtgttggtactgcctacgttagtggaa
cacaacagcaacacctttaagcctgggtatgtgtcctcctcctcatcagcccgccaaggg
ggctacggagcccactggacccagaacaactctcttcatcgctcagtcagacagcatcac
agccacatcagcaccnatgctgatccctacgtcattaagactactcacggcaaggagaag
gttcaggagacccaaatctga
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