KEGG   Trematomus bernacchii (emerald rockcod): 117493339
Entry
117493339         CDS       T09643                                 
Symbol
atad5a
Name
(RefSeq) ATPase family AAA domain-containing protein 5 isoform X1
  KO
K26118  ATPase family AAA domain-containing protein 5
Organism
tben  Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:tben00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tben03032]
    117493339 (atad5a)
DNA replication proteins [BR:tben03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    117493339 (atad5a)
SSDB
Motif
Pfam: AAA AAA_22 Rad17 T2SSE NTPase_1 AAA_14 AAA_16
Other DBs
NCBI-GeneID: 117493339
NCBI-ProteinID: XP_033999740
EnsemblRapid: ENSTBNG00005016039
LinkDB
Position
Unknown
AA seq 1799 aa
MMAGVVAMASVIEDFDTQPCKKSHKDGGSPVVKTIKNYFSPVPKPEEKPFSPPRSNNIMD
YFNRKAPSSKEKTSSPELSKENCRTSQPAEKHTSPEAAVKKPSQKRTRKASKVARKLVEA
ETISFTEEPSCLIVEEQHEIRDSASEAISSCGVLGSDTAALIAQLSAEACITGGESESNT
TKTVSVEQAEEDGSKCGNGVKPNLELIGIELSPILPSKDKAKRVKTVARNTKKAKHSEPE
ENESSLCDVSMEVNLDEASQLNHSTVTVSFEEFVRNQDKRKGAEDKEDASKITPEAEGIV
SDQMEILKAEENVLSGVSPFHVSPRTVTIQAEVHVVSPKHQVAKAGGKLATIFNRRKGQM
SPAEVVSSPHTESGHQLPFASLTVKRKSNVVLQEEDLELAVIESESTPRSSEAVKKQFMA
AFKQPGLDGSKSKPGKSQGKQKQAGEKAADDADKAAEEVTPPSAEQVPAAMQENKVAKKK
QARKGRKKAKEGKDAPPAAEETAATVVEVDDEPPITSTPSVPEARRSRREGAVRQTPEAP
PTSPIRKTKKRNKSKDAAAALPADSPAHISTSKTRKSKHGVFLSEVVCSPDTQESPIRIR
FTRVHRNVPKSKADSESSTNTSLATKPSKDSKTRKQAKKLVKKAKVIQQSKKTAVKEKVT
LRRSSRTEAASYDKKIYCEDENSVICVENEQTVTPQTPKEKSKSKKHLRSLNEVLGKASS
AKTSPGSKGAALGQEKKVPTVISIFDESGSENSQDDEQFRARRDFLKSGLPETFRKQIAK
TTSTREAYSLSCSSFQTVTHIQQQPQDCPLWSLLWPESSLLCHLKELWSQTSNPPPVSGS
LCVKTQPDPRAFCQRGSGWRPEISESVRRLLTEEISTANPSFDVEMFLTRFLKRRADHQQ
QCTASDPEAETRVSSTTPPAEPVVGKRKRRDDEGETTAKLAKKQRANCAEENVSEPEPTK
RRGRPRRAQRSRTEDAANENSKPSAKGAASPSVDDSVIEVGDSPVGESAGKKDVMKEDVL
WTDKYQPQHSSDIIGNTASVRRLHSWLKGWKLRADREERKNQKEKKREESGNDSEWDCGE
EDSQEGEDTLCNTMIITGPTGVGKTAAVYACAQELGFKVFEVNASSQRSGRLILSQLKEA
TQSHQVDSQGVNAHKPTYFNSYSTSSSTGPLKPGSSPRKFNSPRRVVSSPRKHPQSPRVA
RKGNLAPTSLANFFKMGRPTDVETPNTKKNEQTAASKKVIKAKECAIKPKAPAVDSPAAT
TPKEKNSEEQSKKTATSLILFEEVDVIFDDDSGFLAAIKTFMTTTKRPVILTTSDPAFSS
MFDGDFEEIIFKTPSMLDVSSFLQLLCLTEDVRTDVPDISALLRLNGCDIRQSLLQLQFW
TRSAGGRHLTRPLTHTGKSELKPEADEEAAGVTLPPCESGCTESMLGLLNVEPERDMWEL
LRGPGEETLRWELLTNCKHRGVDLLYSNMETLLPLPHTQLTTSTYKPEPSVSAAQEHPAD
PKELPSHTRLLQTSESADCSEDSSPVKMSNRMKKNKKRHCLPERDGLNSDSESEDDFLSL
CKPQGAPQAKEEVKETLVSQKVKRKPLTPEERLKSLPVSQCLDSIADFFDNMSYMDSLLV
GGDERRNMSSLGAVLKDGMTEESRLESDRESWMRAERIMEISAAVEALSFNRCRAAAVET
WRKAQQLQGELGEQAAAELTLPVAAHCEGYSFTQDGPCQPQMAQRRREVMDSLMFRGVSG
TLGNRPAAALDYLPALRTVCRSEQLKEQGKVKRRFLHYLEAINLGLDKRTLQLLAEDFP
NT seq 5400 nt   +upstreamnt  +downstreamnt
atgatggctggtgttgtggctatggcatctgtcattgaggactttgacacccagccttgc
aagaaatctcacaaagatggcggcagtcctgttgtcaagacgatcaaaaactacttctct
cctgtgcccaagcctgaggagaaacccttttcacctccgcgctccaacaacatcatggac
tactttaaccgtaaagctccgtcctcgaaagaaaagaccagctcacctgaactgtcaaaa
gagaactgtcggacttctcaacctgctgaaaaacacaccagcccagaggcagcagtgaaa
aagccatcacagaaacggactagaaaggccagcaaagttgcaagaaaacttgtggaggct
gaaaccataagttttacagaggaaccaagctgcctgattgtagaagaacaacatgaaatc
agagactcggcatcagaagccatcagcagctgtggtgttcttggcagtgatacagcggcc
ctgatcgcccagcttagtgctgaggcctgtatcactgggggggaatcagagagtaatacc
actaagactgtcagtgttgagcaggctgaagaagatggttccaaatgtggaaacggtgtc
aaacctaatctggaactgattggtattgaattatctccaattttaccatcaaaagataaa
gcaaaacgagtcaaaactgtggcacggaatactaagaaggcaaagcactcagaaccagag
gagaacgagagctccttgtgtgatgttagtatggaggtcaatttggatgaggcctctcag
ttaaaccacagcactgtcacggtctcctttgaggaatttgtgcggaaccaggacaagagg
aagggtgcagaggacaaagaagatgcaagtaaaatcacacctgaggcagaaggaatagtc
tctgaccaaatggagatccttaaagcagaggaaaatgttctttcaggagtgtcacctttc
catgtctcgcccagaactgtcaccatccaggcagaggtgcatgtagtctcacctaaacac
caagtagccaaggcaggaggaaagttagctacaatcttcaacaggagaaaaggtcagatg
agccctgcagaggttgtatcgtctcctcacacagagtccggacaccaacttccttttgcc
tctttgactgtcaagcgtaaatctaacgtggttcttcaagaggaagacttggagctggct
gtgatcgagagtgaatccacaccacggagcagcgaggcagtgaagaagcagttcatggct
gccttcaaacagcccggtctggatgggtccaaaagcaagcctggaaagagccagggcaag
cagaagcaagctggagagaaagctgcggatgatgcagacaaagctgctgaagaagtaact
ccaccctctgctgagcaagtgcctgctgccatgcaagaaaataaagtggctaaaaagaaa
caagcaaggaaaggcagaaagaaagctaaagaaggaaaggatgctccacctgctgctgaa
gaaacagcggccacagttgttgaggttgatgatgagcctcccatcacttcaactccctcc
gtcccagaagcgaggagatccaggagagagggggcagtaaggcaaactcccgaagccccc
ccaacatcccctatcaggaaaaccaagaaacgaaacaagtcaaaggatgcggctgctgct
ttacctgcggacagccctgcacatatttccacctcaaagacacgcaagtccaaacatgga
gtcttcttatcggaggttgtgtgctcacctgacacacaagaaagtccaataaggattaga
tttaccagagtccatagaaatgttcccaagtccaaggctgacagtgaaagtagcaccaac
acctctttagctactaaaccatcaaaggactctaaaacaaggaagcaggcaaagaagttg
gtgaagaaagccaaagtgattcagcagagtaaaaaaactgccgtcaaggagaaggtcacc
ttaaggcgttcgtctcgaactgaggccgcctcctacgacaagaagatctactgtgaagac
gagaactctgtcatctgcgtggagaacgaacagacggtcactcctcagacgccaaaagaa
aagagtaaaagcaagaagcatttacggagtctgaatgaagttctggggaaagcttcatct
gccaagactagcccaggctccaaaggggccgcgctgggccaagagaagaaggtccccaca
gtgatttccatctttgatgagagcggctctgaaaactcccaggatgacgagcagttcagg
gcgcgcagagatttcttaaagagcggtctgcccgagaccttcaggaaacagatcgccaag
acaacgtcaaccagagaggcctactcgctgtcctgctcctcctttcagactgttactcac
atccagcaacaaccacaagactgccctctttggagtttactatggcccgagtcttcgtta
ctgtgtcacctgaaagagctttggagccaaacatcaaaccctccacctgtgagcggctcc
ctctgtgtgaagacacaaccagacccaagagccttttgtcaacggggttctggctggagg
cctgagatctctgaaagtgttcgtcggcttctaacggaggagatcagcaccgctaaccct
tccttcgatgttgagatgttcctcactcgcttcctaaagagacgcgctgaccaccagcag
cagtgcacggcctcagaccctgaagctgaaaccagagtctccagcaccacaccgcccgct
gaaccagtagtagggaagaggaagaggagggatgatgagggggaaacgaccgccaagctg
gccaagaagcagcgcgccaactgtgccgaggaaaacgtttcggagcccgagccaacgaaa
agacgaggacgcccgagacgagctcagagatcgaggacagaggacgcggcgaatgagaac
tcaaagccttcagccaaaggtgctgcctccccgtctgtagatgactctgtgattgaggtc
ggtgactcgcctgtcggagagagcgctgggaaaaaagatgtgatgaaggaggacgtgctc
tggacggacaaatatcagccccagcactccagtgacatcatcggcaacaccgcctcagtg
aggaggctgcacagctggctgaagggatggaaacttcgtgcagatcgggaagagagaaaa
aatcagaaagagaagaaacgggaggaaagcggaaatgactcggagtgggactgcggagag
gaggactctcaggaaggagaggacacgttgtgtaatacgatgatcatcaccggacccact
ggagtagggaagactgcagcggtctacgcctgtgcccaggagctgggcttcaaggtgttt
gaggtgaatgcttcgtctcagcgcagcggccgtctgatcctgtcccagctgaaggaagcc
actcagtctcaccaggtggacagtcagggggtcaacgcacacaagcccacctacttcaac
agctacagcacaagcagcagcactggccctctcaagcctggatcctcgcccagaaagttt
aactctcctcgcagggtggtttcctctcccaggaaacatccacagtccccaagagttgct
cggaaaggaaacctggctccaacctccttagctaacttcttcaaaatgggtcgacccacc
gatgtggagacacccaacaccaagaagaatgaacaaacggctgcttccaagaaagtcatc
aaagcaaaagaatgtgccatcaagcccaaagcccctgcggtggattcaccagcagctacc
acccctaaagagaagaacagtgaagaacagagcaagaagacggccacctcgctgatcctg
tttgaagaagtggatgttatttttgacgatgactcagggtttctagctgccatcaagact
tttatgacgactacaaagcggccagttatcctcaccaccagcgatcctgctttcagctcc
atgttcgatggcgactttgaagagattattttcaaaacaccctcaatgttggatgtgagc
agcttcctgcagctgttgtgtctgacggaggacgtgaggacagacgtcccggacatcagc
gctctgctcagactcaacggatgcgacatcaggcagagtttactgcagctgcagttctgg
acacgcagcgcaggaggccgccacctgaccaggccactgacacacactggcaaaagtgag
ctaaagccagaggctgatgaagaggcagcaggcgtgactctccctccctgtgaaagcggc
tgcacagagagcatgctgggtcttctgaatgtggagcctgagcgagacatgtgggagctg
ctcaggggtccgggcgaggagacgttacgctgggagcttctgactaactgcaagcatcga
ggagtggacctgctctattccaacatggagactctcttacctctaccacacacacagctg
actacctccacatacaaaccggagccatctgtctctgcagcacaagaacatcctgctgat
ccaaaagagctgccatcacataccaggttactacaaacctcagagtctgcagattgctcc
gaagacagcagtccagtgaagatgtccaacagaatgaagaagaacaagaagcggcactgt
ctacctgaaagggacggactgaactccgactcggagtcagaagacgattttctatccctc
tgcaagccgcagggcgctcctcaagcgaaggaggaagtcaaggagactttggtttcccag
aaggtgaagagaaagcctctgactcctgaggagcggctaaaaagtctccccgtctcgcag
tgtctagactcaatagctgactttttcgacaacatgtcgtacatggactccttgcttgtt
gggggtgacgagcgcagaaatatgtcctcgctgggagcggtgctgaaagacgggatgacc
gaggagtcgcggctggagtctgacagagagagctggatgagagcagagcgcatcatggag
atctctgccgctgtggaggctctgagcttcaacaggtgtcgggccgcagcagtggagacc
tggaggaaagcccagcagctgcagggggagctgggagagcaggcggcggcagagctcacc
ctgcctgtagctgctcattgtgagggttacagcttcacccaggacggcccctgtcaacca
cagatggcccagcggaggagggaagtgatggacagtctgatgttcagaggagtttctggt
actctgggaaacagaccagccgctgctctggattatttacccgccctccgcaccgtctgc
agatcagagcagctgaaggagcagggcaaggttaaacgaaggttcctgcactacctggag
gcgatcaacctcggtctagacaagagaactctgcagctcctggctgaagacttcccctga

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