Trematomus bernacchii (emerald rockcod): 117495020
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Entry
117495020 CDS
T09643
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117495020
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117495020
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-RING_10
zf-Nse
U-box
TMEM106_N
Gp58
RSS_P20
Nop16
Motif
Other DBs
NCBI-GeneID:
117495020
NCBI-ProteinID:
XP_034001969
EnsemblRapid:
ENSTBNG00005018036
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MAQKGVQLDRELLSCPICLDLLKDPVTTSCGHSYCMKCIKGFWDGEDEKKIHSCPQCRQS
FTPRPVLLKNTMLAALVEELKKTGLQAAPADLCYAGAEDVACDVCTGRKLRACKSCLVCL
ISYCDQHLQSHYELPAFKKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQCICYLCSVDE
HKGHDTVSAAAERTERQRELEGSRLNIQQRIQDREKEVKLLQQEVEAVNGSADKAVEDSE
KMFTELIRLMEKRSSDVKQQLRSQQKREVSRVKELQEKLEQEISELKRRDAELKLLSHTE
DHNQFLHSYPSLSALSEPTHSSSINIRPLSYFEDVTAALSALRDKLQDVLREEWTNVSPT
EVEVLLPAAEPTTRAGFLTYSQEVTLDPNTAYRELLLSEGSRKATHMKQRQSYSSHPDRF
TCYEQVLSRESLTGRCYWEVEWRGWLVCVAVAYKNISRAGWRTECVFGHNDKSWSLVCNQ
NSYSFCYNSISTPVSGPLSSRVGVYLDHRAGVLSFYSIVSETMTLLHREQTTFTQPLHAG
VQLCNQGDTAELCNLK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccgggaactcttatcttgtccgatctgtctggat
ctactgaaggatccggtgactacttcctgtggacacagctactgcatgaagtgtattaaa
ggcttctgggacggagaggatgagaagaagatccacagctgccctcagtgcaggcagagc
ttcacaccgaggcctgtcctgctgaagaacaccatgctagcagctttagtggaggagctg
aagaagactggactccaagctgctcctgctgatctctgctatgctggagctgaagatgtg
gcctgtgatgtctgcactgggaggaaactgagagcctgtaagtcctgcctcgtgtgtctt
atatcttattgtgaccaacacctccagtctcattatgaattgcctgcctttaaaaaacac
aagctggtggagccctccaagaagctccaggagaacatctgctctcgtcacgacgaggtg
atgaagatgttctgccgcactgatcagcagtgtatctgttatctctgctctgtggacgaa
cacaaaggccacgacacggtgtcagctgcagcagagaggactgagaggcagagagagctg
gaggggagtcgactaaacatccagcagagaatccaggacagagagaaggaggtgaagctg
cttcagcaggaggtggaggccgtcaatggctctgctgataaagcagtggaggacagtgag
aagatgttcactgagctgatccgtctcatggagaagagaagctctgatgtgaagcagcag
ctcagatcccagcagaagagagaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatctctgagctgaagaggagagacgctgagctgaagctgctgtctcacacagag
gatcacaaccagtttctgcacagctacccctcactgtcagccctcagtgaacctacacac
tcctccagcatcaacatccgtcctctgagctactttgaggacgtgacggcggccctgtca
gcactcagagacaaactacaggacgtcctgagagaggaatggacaaacgtctcaccgact
gaagtggaggttttactgccagcagcagagcccaccaccagagctgggttcttaacatat
tcacaggaagtcactctggatccaaacacagcatacagagagctgttattatctgagggg
agcagaaaagcaacacacatgaaacaacgtcagtcttattctagtcacccagacagattc
acttgttatgagcaggtcctgagtagagagagtctgactggacgttgttactgggaggtg
gagtggagagggtggttagtttgtgttgcagtcgcatacaagaatatcagcagagcaggg
tggaggactgaatgtgtatttggacacaatgacaaatcttggtccttagtttgtaaccaa
aacagttattcattttgttacaacagtatcagcactcccgtctcaggtcctctgtcctcc
agagtaggagtgtacctggatcacagagcaggtgttctgtccttctacagcatcgtctct
gaaaccatgactctcctccacagagagcagaccacattcactcagccgctacatgctggg
gttcagctttgtaatcaaggagacacagctgagttgtgtaacctgaaatag
DBGET
integrated database retrieval system
