Trematomus bernacchii (emerald rockcod): 117495066
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Entry
117495066 CDS
T09643
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tben01002
]
117495066 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117495066 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117495066 (usp13)
Enzymes [BR:
tben01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117495066 (usp13)
Peptidases and inhibitors [BR:
tben01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117495066 (usp13)
Ubiquitin system [BR:
tben04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117495066 (usp13)
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117495066 (usp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
117495066
NCBI-ProteinID:
XP_034002014
EnsemblRapid:
ENSTBNG00005018720
LinkDB
All DBs
Position
Unknown
AA seq
859 aa
AA seq
DB search
MAADLGELLVPYMPTIRVPRTGDRVFKSECAFSFDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKERNTGAAGGAIPRRKNGKVFLDLELNRDFNGEDFEYEDEPKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNAPSAYKKQEPESWDEEIQVSRHARSLIQLD
NGVRIPPSGWKCQKCEMRENLWLNLTDGTVLCGKWFFDGSGGNGHALEHYKETKYPLAVK
MDTITPDGADVYSFEEEEAVLDPHISDHLSHFGIEILQMQTKTENGHHTENNSRQRVSEW
EVIQESGMKLKAVFGSGYTGIKNLGNSCYVGTVIQVLFSIPDFQRMYVGNLQGIFDYSPL
DPSQDFATQMAKLGHGLLSGLYSKPPMKSELIEQVMKEEYKHQQKGISPRMMKSLVSRGH
PEFSSTRQQDAQEFLLHVINMVERNSAGSENPSDAFRFLVEERIQCCQSRRVRYNQRVDY
CIQLPAPFEAATNREELLAYGAKRREAEENMRAPPEPVRARIPFTACLQAFTEPDNVPDF
WSSALQAKSAGVKTSRFSTFPEYLILQIKKFTFGVDWVPKKIDVAIDVPDFLDLSRMRAT
GLQAGEQELPDLLPPIVLAEDTRGNSMGSADSPEIDEAAAMQLAEMGFPVEACRKAVYYT
GNMGPEMAFNWIIAHMEEPDFAEPLTLPSMIDFGPSSSDSPLGAPPLGNSPPEESIAILT
SMGFPRTHSIQALKATNNNLERALDWIFIHPEEEESDVLSDMADTEPNDNGFSNANSHSN
STMSPDREAAGPRVKDGPGRYELFAFISHMGASTMSGHYVCHIKKEGRWVIYNDHKVCLS
ERPPKDLGYIYFYHRLSSS
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacctcggagagctgctggtcccatacatgcccaccatcagagtgcccagg
accggggacagggttttcaagagcgagtgcgccttctccttcgactctcccgagtcagag
ggaggcctgtatgtgtgtatgaacacattcctcggctttggacgagaacatgtggagaga
cattatcgcaaaacaggacagagcgtttacatgcacctcaaacgacacgtcaaagagaga
aatacaggagctgcaggaggcgccatccccagacgaaagaatggaaaagtgtttctagat
ttagagctaaaccgtgattttaacggagaagactttgaatatgaagacgagcccaagctt
gtcatttttccagaccacttcgagatccccttaccaaatattgaggagttgcccgctctg
gtcaccatcgcctgcgacgcagtgctcaatgcaccatcagcttacaagaagcaggagcct
gaatcctgggatgaggagatccaggtgtccagacatgccaggagcctcatacagctggac
aatggggttaggatcccacccagcggctggaagtgtcagaagtgtgagatgagagagaac
ctgtggttgaacctgaccgatggaacagtgctctgtgggaagtggttctttgatgggagc
gggggaaacggccacgctctggagcactacaaagagaccaaatacccgctagctgtcaaa
atggacaccatcacaccagatggagcagatgtgtactcatttgaggaggaggaagctgtt
ttggacccccacatatcagaccacttgtcacactttggaatagaaatactacagatgcag
acaaaaacagagaacggtcaccacacagagaataactcccggcagcgggtcagtgaatgg
gaggtgatccaggagtctggcatgaagctgaaggcggtgtttgggtctggctacactggc
atcaaaaacctgggcaacagctgctacgtcggcacggtgatccaggtcctgttcagcatc
ccagacttccagaggatgtatgtgggtaatctccaggggatatttgactattcacccctc
gaccccagccaggacttcgccacacaaatggctaagctgggacatggactgctctcaggc
ctgtactccaaaccaccaatgaaatccgagctcattgaacaggtgatgaaagaagaatac
aagcaccagcagaagggcatctccccccggatgatgaagtctctggtcagcaggggacac
ccagagttttcctctacgagacaacaagacgcccaggagttcctcctgcacgtcatcaac
atggtggagaggaacagcgcaggctcggagaatccaagcgacgccttccgcttcctggtg
gaggagcgaatccagtgctgccagtctcgtcgggtccgttacaatcagcgggtcgactac
tgcatccagctgccagctccctttgaggcggccaccaatcgagaggagctgctggcatac
ggggccaagcgaagggaagcagaggagaacatgcgggctcctcctgagccggttcgagcc
cggatccccttcaccgcctgcctgcaggccttcacagagccagacaacgtccccgacttc
tggagctcagcgctgcaggccaagtcagccggagtcaaaacttcccgtttctccaccttc
cctgagtatctgattttgcagatcaagaaattcacatttggggttgactgggtgccgaag
aaaatagatgtggccattgatgtcccagactttctggatttgagtcggatgcgagccaca
gggctgcaggccggtgaacaggagctgcctgacctcctgcctcccatcgtgctagctgaa
gacaccagaggtaactccatgggctctgcagactctccagaaatagacgaggcggcagca
atgcagctggcagagatgggcttcccggtggaggcgtgcaggaaggcggtctactacacg
ggcaacatgggccccgagatggccttcaactggatcatagcccacatggaggagcctgac
tttgcagagcctctcactctgccctccatgatagatttcggtccctccagcagtgacagc
cccttgggcgcccccccgctgggaaactcgccccctgaggagagcatcgccatcctcacc
tcgatgggcttcccccgcactcacagcatccaggcactcaaagccacgaataataacctc
gagcgagcactcgactggatcttcatccaccctgaggaagaggagagtgatgtcctctca
gacatggccgacacggagccaaacgacaacggcttctccaacgccaactcacacagcaac
tccacgatgtccccggaccgagaggcagcgggcccccgggtcaaagacggaccgggacgt
tatgagctctttgcgttcatcagtcacatgggagcgtccacaatgtccggacattatgtt
tgtcacatcaagaaggaaggaaggtgggtgatctacaacgaccacaaagtgtgtttgtca
gaaaggcctccaaaagacttgggctacatctacttttaccatcgactgtcaagcagttaa
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integrated database retrieval system
