Trematomus bernacchii (emerald rockcod): 117497289
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Entry
117497289 CDS
T09643
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117497289
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117497289
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
U-box
zf-RING_6
RSS_P20
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
117497289
NCBI-ProteinID:
XP_034005126
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MAQKGVQLDRETLISCPICLDLLKDPVTTPCGHSYCMKCITGFWDGEDEKEIHSCPQCRQ
SFTPRPVMLKNTMLAALVEELKKTGPPPAPADLCYAGAEDVACDVCTGRKLRACKSCLQC
VASYCDKHLQPHYESPVFKKHKLVGPSKKLQENICSRHDEVMKLFCRTDQQCICSLCSVD
EHKGHDTVSAAAERTERQRELEGSRLNIQQRIQDGEKEVKLLQQEVEAVNGSADKAVEDS
EKMFTELIRLMEKRSSDVKQQVRSQQKSEVSRVRELQEKLEQEMAELKRRDAELKLLSHT
EDHNQFLHSYPSLPALSEPTHSSSINIRPLSYFEDVTAALSAVRDKLQDVLREEWTNVSP
TEVEVLLSAAEPTTRAGFLQYSQEITLDPNTAHTQLVLSEGSRKATFTEQHQSYSSHPDR
FTVWSQVLSRESLTGRCYWEVERRGREVFLAVAYKNISRGAGFESVFGNNDKSWSLVCNK
NSYSFRYNSILTPVSGPLSSRVGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQPLHAGV
WLHYNYGGTAEFCKLK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccgggaaaccttaatatcttgtcccatctgtctg
gatctactgaaggatccggtgacgactccctgtggacacagctactgcatgaagtgtatt
acaggcttctgggacggagaggatgagaaggagatccacagctgccctcagtgtaggcag
agcttcacaccgaggcctgtcatgctgaaaaacaccatgttagcagctttagtggaggag
ctgaagaagactggacccccacctgctcctgctgatctctgctatgctggagctgaagat
gtggcctgtgatgtctgcactgggaggaaactgagagcctgtaagtcctgtctgcagtgt
gtggcctcttactgtgacaaacacctccagcctcattatgaatcgcctgtctttaaaaaa
cacaagctggtggggccctccaagaagctccaggagaacatctgctctcgtcacgacgag
gtgatgaagctgttctgccgcaccgatcagcagtgtatctgttctctctgctctgtggac
gaacacaaaggccacgacacagtgtcagctgcggcagagaggactgagaggcagagagag
ctggaggggagtcgactaaacatccagcagagaatccaggacggagagaaggaggtgaag
ctgcttcagcaggaggtggaggccgtcaatggctctgctgataaagcagtggaggacagt
gagaagatgttcactgagctgatccgtctcatggagaaaagaagctctgatgtgaagcag
caggtcagatcccagcagaagagtgaagtgagtcgagtcagagagcttcaggagaagctg
gagcaggagatggctgagctgaagaggagagacgctgagctgaagctgctgtctcacaca
gaggatcacaaccagtttctgcacagctacccctcactgccagccctcagtgaacctaca
cactcatccagcatcaacatccgtcctctgagctactttgaggacgtgacggcggccctg
tcagcagtcagagacaaactacaggacgtcctgagagaggaatggacaaacgtctcaccg
actgaggtggaggttttactgtcagcagcagagcccaccaccagagctgggttcttacaa
tattcacaggagatcacactggatccaaacacagcacacacacagctggtattatctgag
gggagcagaaaagcaacattcacggaacaacatcagtcttattccagtcacccagacaga
ttcactgtatggtctcaggtcctgagtagagagagtctgactggacgttgttactgggag
gtggagcggagagggagagaagttttcttagcagtcgcatacaagaatatcagcagagga
gcagggtttgaaagtgtatttggaaacaatgacaaatcttggtccttagtttgtaacaaa
aacagttattcatttcgttacaacagtatcctcactcccgtctcaggtcctctgtcctcc
agagtaggagtgtacctggatcacagagcaggtattctgtccttctacagcgtctctgaa
accatgactctcctccacagagtccagaccacattcactcagccgctacatgctggagtt
tggcttcattataattatggaggcactgctgagttttgtaaactcaaatag
DBGET
integrated database retrieval system
