Trematomus bernacchii (emerald rockcod): 117500115
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Entry
117500115 CDS
T09643
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117500115
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117500115
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
U-box
zf-RING_6
Gp58
MRP-S31
Prok-RING_4
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
117500115
NCBI-ProteinID:
XP_034008704
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MAQKRVQLDRETFSCSICMDLLKDPVTTSCGHSYCMKCIKAHWDGEDEKKIHSCPQCRQS
FKPRPFLLKNTMLAALVEELKKTGLQAAPADHCYAGAEDVACDVCTGRTLRACKSCLQCL
ASYCDQHLQGHYNVAPLKKHKLVEPSKKLQENNCSRHDEVMRMFCRTDQQCICYLCTVDG
HKGHDTVSAAAERTERQRELEGSRQNIQQRIQDREKEVKLLQQEVEAVNGSADKAVEDSE
KMFTELIRLMEKRSSDVKQQVRSQQKSEVSRVKELQEKLEQEMAELKRRDAELKLLSHTE
DHNQFLHSYPSLSALSEPTHSSSINIRPLSYFEDVTAALSAVRDKLQDVLREEWTNVSPT
EVDVLLSAAEPTTRAGFLQYSQEITLDPNTADTLLLLSEGSRKATNMGQPQSYSSHLDRF
TNYPQVLSRESLTGRCYWEVERRGGEVHVAVAYKNISRAGGGGECRFGLNDKSWALYCYK
KSYSFLYNNIHTPVSGPQSSRVGVYLDHRAGILSFYSRGGISETMTLLHRVQITFTQPLH
AGFWLCYKSTAEFCKLK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaagagttcagctggaccgggaaaccttctcttgttcgatctgtatggat
ctactgaaggatccggtgacgacttcctgtggacacagctactgcatgaagtgtattaaa
gcccactgggatggagaggatgagaagaagatccacagctgccctcagtgtaggcagagc
ttcaaaccgaggcctttcctgctgaaaaacaccatgttagcagctttagtggaggagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagacgtg
gcctgtgatgtctgcactgggagaacactgagagcctgtaagtcctgtctgcagtgtctg
gcctcttattgtgaccaacacctccagggtcattataacgtagctccattaaaaaaacac
aagctggtggagccctccaagaagctccaggagaacaactgctctcgtcacgacgaggtg
atgaggatgttctgccgcactgatcagcagtgtatctgttatctctgcacggtggacgga
cataaaggccacgacacagtgtcagctgcagcagaaaggactgagaggcagagagagctg
gaggggagtcgacaaaacatccagcagagaatccaggacagagagaaggaggtgaagctg
cttcagcaggaggtggaggccgtcaatggctctgctgataaagcagtggaggacagtgag
aagatgttcactgagctgatccgtctcatggagaaaagaagctctgatgtgaagcagcag
gtcagatcccagcagaagagtgaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatggctgagctgaagaggagagacgctgagctgaagctgctgtctcacacagag
gatcacaaccagtttctgcacagctacccctcactgtcagccctcagtgaacctacacac
tcatccagcatcaacatccgtcctctgagctactttgaggacgtgacggcggccctgtca
gcagtcagagacaaactacaggacgtcctgagagaggaatggacaaacgtctcaccgact
gaagtggatgttttactgtcagcagcagagcccaccaccagagctgggttcttacaatat
tcacaggagatcactctggatccaaacacagcagacacactgctgttattatctgagggg
agcagaaaagcaacaaacatgggacaaccacagtcttattctagtcacctagacagattc
actaattatcctcaggtcctgagtagagagagtctgactggacgttgttactgggaggtg
gagcggagagggggagaagttcatgtagcagtcgcatacaagaatatcagcagagcaggg
ggtgggggtgaatgtagatttggactcaatgacaaatcctgggcattatattgttacaaa
aaaagttattcatttctttacaacaatatccacactcccgtctcaggtcctcagtcctcc
agagtaggagtgtacctggatcacagagcaggtattctgtccttctacagcaggggtggc
atctctgaaaccatgactctcctccacagagtccagatcacattcactcagccgctacat
gctggattttggctttgttataaatccacagctgagttttgtaaactgaaatag
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integrated database retrieval system
