Trematomus bernacchii (emerald rockcod): 117500123
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Entry
117500123 CDS
T09643
Name
(RefSeq) tripartite motif-containing protein 16-like protein
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117500123
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117500123
BRITE hierarchy
Motif
Pfam:
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
SPRY
DUF1319
FYDLN_acid
zf-RING_10
Prok-RING_4
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
117500123
NCBI-ProteinID:
XP_034008711
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MAEKEIELDSISCKICWDVLKDPVTTPCGHSYCMDCLQCFWDKEKPPVSCPECKQTFRRR
PDLLKNTMLACLVEELKTGLLPMESTEMYGEIRRTSLDIQQIIQEGEEDVKLLRQERRSD
VKQQIKTEQETGVRRVKDHQEKLEQRITDLRGKVADLEKVFLQAHRLKNTDLEDLFDSIE
LTSSDISPTPKFEEVKAAVSELRDRITDALRETEISKMETQDVSLTNLEPETRVECLKYA
RRVTMDPNTINNRLRLSMGNRLVTLGDKELSYRSNVERFTKGWQALSRQSLTGRCYFEVE
IWGAATIALSYKSISRDLLFEDDSLSWKVFCCNHGPTFEFLDSRKVDMGDITFGFNDLCS
YSLNDHTMLGVFESEISGPQSSRVGVYLDHDAGILCFYRLSETMTLLHRVETRFTEPLHA
GVALYGPGGPHGDRVEFSKLSERK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaaagaaattgagctggactccatctcctgtaagatatgttgggacgtactg
aaggatccggtgactactccctgtggacacagctactgcatggactgccttcagtgcttc
tgggataaagagaaaccaccagtcagctgtcctgagtgtaagcagaccttcagacgcaga
cctgacctgttgaaaaacaccatgttagcatgtctggtggaggaactgaagacgggactc
ctgcctatggaatcaactgagatgtacggtgagattagacgtacttcacttgatatccag
caaataatccaggagggagaggaagatgtgaagctacttcgacaggagagaagatctgat
gtgaagcagcagatcaaaaccgagcaggaaactggagtgaggcgagtcaaagatcatcag
gagaagctggagcagaggatcaccgacctgaggggaaaagttgcagacctggagaaggtc
tttctccaagctcatcgactaaagaacactgacctggaggacctgtttgactctatagaa
ctaaccagcagcgacatctctcccacgccaaagtttgaggaggtgaaagcagccgtctca
gaactcagagatagaattacggatgctctgagagagacagaaatctcaaagatggagact
caggatgtttcactgaccaatctagagccagagaccagagttgaatgccttaaatatgct
cgtagagtcaccatggaccctaacacaataaataacagattgagattatccatggggaac
agattagtgacattaggggataaggaactgtcgtatcgaagcaacgtagaaagattcacc
aaaggttggcaggccctgagccgccagagtctgactggacgttgttacttcgaggtggag
atttggggagcagctactattgcactttcgtacaagagcatcagcagagacttacttttt
gaggacgacagcctgtcctggaaagtgttttgctgtaatcatggtcctacatttgagttt
ttagactccaggaaagtggacatgggggacattacatttggattcaatgacctctgcagc
tattcattaaatgatcacactatgcttggtgtatttgagtctgaaatctcaggtcctcag
tcctccagagtaggagtgtacctggatcacgatgcaggtatcctgtgcttctacagactc
tctgaaaccatgaccctcctccaccgagtggagaccagattcactgagcctctccacgcc
ggagttgcattgtatggtcctggtggtcctcatggtgacagagttgagttcagcaaactc
tcagaacgaaagtaa
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