Trematomus bernacchii (emerald rockcod): 117500145
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Entry
117500145 CDS
T09643
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117500145
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117500145
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
U-box
Prok-RING_4
zf-RING_6
Gp58
Motif
Other DBs
NCBI-GeneID:
117500145
NCBI-ProteinID:
XP_034008743
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MAQKGVQLDRETFSCSICLDLLKDPVAIPCGHSYCMKCIKGFWDGEDEKKIHSCPQCRQS
FTPRPVLLKNTMLAALVEELKKTGLQAAPADHCYAGAEDVACDVCTGKKLRACKSCLVCL
ASYCDKHLQCHNEFNNVLKKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQCICYLCSVE
EHKGHDTVSAAAERTERQRELEGSRLNIQQRIQDREKEVKLLQQEVEAVNGSADKAVEDS
EKMFTELIRLMEKRSSDVKQQVRSQQKSEVSRVKELQEKLEQEMAELKRRDAELKLLSHT
EDHNQFLLSYPSLSALSEPTHSSSINIRPLSYFEDVTAALSAVRDKLQDVLREEWTNVSS
TEVDVLLSAAEPTTRAGFFKYSQEITLDPNTACTLLLLSEGSRKATNMKQHQSYSSHPDR
FTYCVQVLSRESLTGRCYWEVEWRGGDVSVAVAYKNISRAGGGSLFGYNDKSWSLDCNQN
SFSFRDNNIKTPVSGPLSSRVGVYLDHRAGILSFYSISETMTLLHRVQTTFTQPLHAGVW
PGYVGDTAEFCKLK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccgggaaaccttctcttgttcgatctgtctggat
ctactgaaggatccggtggctattccctgtggacacagctactgcatgaagtgtattaaa
ggcttctgggatggagaggatgagaagaagatccacagctgccctcagtgtaggcagagc
ttcacaccgaggcctgtcctgctgaaaaacaccatgttagcagctttagtggaggagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtg
gcctgtgatgtctgcactgggaaaaaactgagagcctgtaagtcctgcctcgtgtgtctg
gcctcttattgtgacaaacacctccagtgtcataatgaatttaataatgtattgaaaaaa
cacaagctggtggagccctccaagaagctccaggagaacatctgctctcgtcacgacgag
gtgatgaagatgttctgtcgcactgatcagcagtgtatctgttatctctgctctgtggag
gaacacaaaggccacgacacagtgtcagctgctgcagagaggactgagaggcagagagag
ctggaggggagtcgactaaacatccagcagagaatccaggacagagagaaggaggtgaag
ctgcttcagcaggaggtggaggccgtcaatggctctgctgataaagcagtggaggacagt
gagaagatgttcactgagctgatccgtctcatggagaaaagaagctctgatgtgaagcag
caggtcagatcccagcagaagagtgaagtgagtcgagtcaaagagcttcaggagaagctg
gagcaggagatggctgagctgaagaggagagacgctgagctgaagctgctgtctcacaca
gaggatcacaaccagtttctgctcagctacccctcactgtcagccctcagtgaacctaca
cactcatccagcatcaacatccgtcctctgagctactttgaggacgtgacggcggccctg
tcagcagtcagagacaaactacaggacgtcctgagagaggaatggacaaacgtctcatcg
actgaagtggatgttttactgtcagcagcagagcccaccaccagagctgggttcttcaaa
tattcacaggagatcacactggatccaaacacagcatgcacactgctgttattatctgag
gggagcagaaaagcaacaaacatgaaacaacatcagtcttattctagtcacccagacaga
ttcacttattgtgttcaggtcctgagtagagagagtctgactggacgctgttactgggag
gtggagtggagagggggagacgtttctgtagcagtcgcatacaagaatatcagcagagca
gggggtggaagtctatttggatacaatgacaaatcttggtccttagattgtaaccaaaac
agtttttcatttcgtgacaacaatatcaaaactcccgtctcaggtcctctgtcctccaga
gtaggagtgtacctggatcacagagcaggtattctgtccttctacagcatctctgaaacc
atgactctcctccacagagtccagaccacattcactcagccgctacatgctggagtttgg
cctggttatgttggagacacagctgagttttgtaaactgaaatag
DBGET
integrated database retrieval system