KEGG   Trematomus bernacchii (emerald rockcod): 117500145
Entry
117500145         CDS       T09643                                 
Name
(RefSeq) tripartite motif-containing protein 16-like
  KO
K12006  tripartite motif-containing protein 16
Organism
tben  Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:tben00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tben04121]
    117500145
Ubiquitin system [BR:tben04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    117500145
Motif
Pfam: PRY zf-C3HC4_4 zf-RING_UBOX zf-B_box SPRY zf-C3HC4 zf-C3HC4_3 zf-C3HC4_2 zf-RING_2 zf-RING_5 U-box Prok-RING_4 zf-RING_6 Gp58
Other DBs
NCBI-GeneID: 117500145
NCBI-ProteinID: XP_034008743
LinkDB
Position
Unknown
AA seq 554 aa
MAQKGVQLDRETFSCSICLDLLKDPVAIPCGHSYCMKCIKGFWDGEDEKKIHSCPQCRQS
FTPRPVLLKNTMLAALVEELKKTGLQAAPADHCYAGAEDVACDVCTGKKLRACKSCLVCL
ASYCDKHLQCHNEFNNVLKKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQCICYLCSVE
EHKGHDTVSAAAERTERQRELEGSRLNIQQRIQDREKEVKLLQQEVEAVNGSADKAVEDS
EKMFTELIRLMEKRSSDVKQQVRSQQKSEVSRVKELQEKLEQEMAELKRRDAELKLLSHT
EDHNQFLLSYPSLSALSEPTHSSSINIRPLSYFEDVTAALSAVRDKLQDVLREEWTNVSS
TEVDVLLSAAEPTTRAGFFKYSQEITLDPNTACTLLLLSEGSRKATNMKQHQSYSSHPDR
FTYCVQVLSRESLTGRCYWEVEWRGGDVSVAVAYKNISRAGGGSLFGYNDKSWSLDCNQN
SFSFRDNNIKTPVSGPLSSRVGVYLDHRAGILSFYSISETMTLLHRVQTTFTQPLHAGVW
PGYVGDTAEFCKLK
NT seq 1665 nt   +upstreamnt  +downstreamnt
atggcgcagaaaggagttcagctggaccgggaaaccttctcttgttcgatctgtctggat
ctactgaaggatccggtggctattccctgtggacacagctactgcatgaagtgtattaaa
ggcttctgggatggagaggatgagaagaagatccacagctgccctcagtgtaggcagagc
ttcacaccgaggcctgtcctgctgaaaaacaccatgttagcagctttagtggaggagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtg
gcctgtgatgtctgcactgggaaaaaactgagagcctgtaagtcctgcctcgtgtgtctg
gcctcttattgtgacaaacacctccagtgtcataatgaatttaataatgtattgaaaaaa
cacaagctggtggagccctccaagaagctccaggagaacatctgctctcgtcacgacgag
gtgatgaagatgttctgtcgcactgatcagcagtgtatctgttatctctgctctgtggag
gaacacaaaggccacgacacagtgtcagctgctgcagagaggactgagaggcagagagag
ctggaggggagtcgactaaacatccagcagagaatccaggacagagagaaggaggtgaag
ctgcttcagcaggaggtggaggccgtcaatggctctgctgataaagcagtggaggacagt
gagaagatgttcactgagctgatccgtctcatggagaaaagaagctctgatgtgaagcag
caggtcagatcccagcagaagagtgaagtgagtcgagtcaaagagcttcaggagaagctg
gagcaggagatggctgagctgaagaggagagacgctgagctgaagctgctgtctcacaca
gaggatcacaaccagtttctgctcagctacccctcactgtcagccctcagtgaacctaca
cactcatccagcatcaacatccgtcctctgagctactttgaggacgtgacggcggccctg
tcagcagtcagagacaaactacaggacgtcctgagagaggaatggacaaacgtctcatcg
actgaagtggatgttttactgtcagcagcagagcccaccaccagagctgggttcttcaaa
tattcacaggagatcacactggatccaaacacagcatgcacactgctgttattatctgag
gggagcagaaaagcaacaaacatgaaacaacatcagtcttattctagtcacccagacaga
ttcacttattgtgttcaggtcctgagtagagagagtctgactggacgctgttactgggag
gtggagtggagagggggagacgtttctgtagcagtcgcatacaagaatatcagcagagca
gggggtggaagtctatttggatacaatgacaaatcttggtccttagattgtaaccaaaac
agtttttcatttcgtgacaacaatatcaaaactcccgtctcaggtcctctgtcctccaga
gtaggagtgtacctggatcacagagcaggtattctgtccttctacagcatctctgaaacc
atgactctcctccacagagtccagaccacattcactcagccgctacatgctggagtttgg
cctggttatgttggagacacagctgagttttgtaaactgaaatag

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