Trematomus bernacchii (emerald rockcod): 117500173
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Entry
117500173 CDS
T09643
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117500173
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117500173
BRITE hierarchy
Motif
Pfam:
zf-C3HC4_4
PRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-RING_10
U-box
Prok-RING_4
zf-RING_6
zf-RING_11
Gp58
MRP-S31
RSS_P20
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
117500173
NCBI-ProteinID:
XP_034008816
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MAQKGVQLDRETFSCSICLDLLKDPVAIPCGHSYCMKCITGFWDGEDEKKIHSCPQCRQS
FTPRPVLLKNTMLAALVEELKKTGLKAAPADHCYAGAEDVACDVCTGRKLKACKSCLTCF
ISYCDKHLQPHYELPAFKKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQCICYLCSVDE
HKGHDTVSAAAERTERQRELEGSRQNIQQRIQDREKEVKLLQQEVEAVNGSADKAVEDSE
KMFTELIRLMEKRSSDVKQQVRSQQKSEVSRVRELQEKLEQEMAELKRRDAELKLLSHTE
DHNQFLLSYPSLSALSEPTHSSSINIRLLSYFEDVKAALSAVRDKLQDVLREEWTNVSPT
EVDVLLSPAEPTTRAGFFKYSQEITLDPKPAYTQLLLSEGSRKATRMGQHSYSSHPDKFT
DWPQVLSRESLTGHVLLGGGAERAGVFVAVHTRISAEQGWV
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccgggaaaccttctcgtgttcgatctgtctggat
ctactgaaggatccggtggctattccctgtggacacagctactgcatgaagtgtattaca
ggcttctgggatggagaggatgagaagaagatccacagctgccctcagtgtaggcagagc
ttcacaccgaggcctgtcctgctgaaaaacactatgttagcagctttagtggaggagctg
aagaagactggactcaaagctgctcctgctgatcactgctatgctggagctgaagatgtg
gcctgtgatgtctgcaccgggagaaaactgaaagcctgtaagtcctgtcttacgtgtttt
atatcttattgtgacaaacacctccagcctcattatgaattgcctgcctttaaaaaacac
aagctggtggagccctccaagaagctccaggagaacatctgctctcgtcacgacgaggtg
atgaagatgttctgccgcactgatcaacagtgtatctgttatctctgctctgtggacgaa
cacaaaggccacgacacagtgtcagctgctgcagaaaggactgagaggcagagagagctg
gaggggagtcgacaaaacatccagcagagaatccaggacagagagaaggaggtgaagctg
cttcagcaggaggtggaggccgtcaatggctctgctgataaagcagtggaggacagtgag
aagatgttcactgagctgatccgtctcatggagaaaagaagctctgatgtgaagcagcag
gtcagatcccagcagaagagtgaagtgagtcgagtcagagagcttcaggagaagctggag
caggagatggctgagctgaagaggagagacgctgagctgaagctgctctctcacacagag
gatcacaaccagtttctgctcagctacccctcactgtcagccctcagtgaacctacacac
tcatccagcatcaacatccgtcttctgagctactttgaggacgtgaaggcggccctgtca
gcagtcagagacaaactacaggacgtcctgagagaggaatggacaaacgtctcaccgact
gaagtggatgttttactgtcaccagcagagcccaccaccagagctgggttcttcaaatat
tcacaggaaatcacactggatccaaaaccagcatacacacagctgttattatctgagggg
agcagaaaagcaacacgcatgggacaacactcttattctagtcatccagacaaattcact
gattggcctcaggtcctgagtagagagagtctgactggacatgtgttactgggaggtgga
gcggagagggcaggagtttttgtagcagtccatacaagaatatcagcagagcaggggtgg
gtatga
DBGET
integrated database retrieval system
