Trematomus bernacchii (emerald rockcod): 117500294
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Entry
117500294 CDS
T09643
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117500294
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117500294
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
117500294
NCBI-ProteinID:
XP_034009000
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MAQGIHLDRANFCCSICLDLLKDPVTFSCGHNYCMVCITDHLDTQDDRRIYTCPQCRQKF
MQRPAVVKNNMLAFVVGELMKIETPAIAPPPPSSPDFDDDHSSDQTEHVACDFCEEKAIK
SCLQCMVSYCVEHLRPHFEVAPLQKHKLVEASAQLQENICPRHQEVMKLFCRTDQQCICY
LCSKDTHKGHNKVSTAAERVERQRELQVTRQNIRKTIQDKEKDAKWFQQEEDTINRYAEA
ALRNNENTYKELMHIIEKSVAEVKEKVTSRQETEVRWYKKVREKLEQDVAELKRKDEEMK
KFSHTEDHTRFLIKYPTLASLNESTDPPPVKARRVGYFEKVSMALSEAKVNLRVIVGEEY
AKVSMTVTGVITSNTKEEPFTRADFLHYACQVTLDPNTANTHLKISGNDKMVAFVSDEQK
YPLHPERFVYCWQLLSKGSLDGRSYWEVELSGTGAFVAVVYKDISRLGGFTESMFGYNDK
SWALDCYKNTCTFRHDNVRTRIPGMWSSRVGVYLDPDAGVLSFYSVSETRTLLHRVQTKF
TQPLYAGLWLSDGASAEVCRIR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggggatccatcttgatcgagcaaatttctgctgctcaatctgtctggatttg
ctgaaggacccggtgactttttcctgtggacacaactattgcatggtgtgtatcacggac
cacttagatactcaggatgatagaaggatctacacctgtcctcagtgccggcagaaattc
atgcaaagacctgccgtggtaaaaaacaacatgttggcgtttgtggtcggggagctgatg
aagattgaaaccccagcaattgctcctcctcctccttcttctcctgattttgatgatgat
cacagctctgatcaaactgaacatgtggcctgtgatttctgtgaagaaaaagctatcaag
tcctgtctgcaatgtatggtttcttattgcgtggaacacctccgaccacactttgaagta
gcccccttacagaaacacaagctagtggaagcgtccgcacagctccaggagaacatctgc
cctcgtcatcaagaagtgatgaagctgttctgccgtacggatcagcagtgcatctgctat
ctctgttcgaaagatactcacaaaggccacaataaagtctcgactgcagcagaaagggtg
gagaggcagagagagcttcaggtgactcggcaaaacatccgtaagacgatccaggacaaa
gagaaagacgcaaagtggtttcaacaggaggaagacaccattaatcgatacgctgaagct
gctctgagaaacaacgagaacacctacaaagaactgatgcatatcattgagaaaagtgtt
gcagaagtgaaggagaaggttacatctcgacaggaaaccgaagtcaggtggtacaaaaag
gttcgggagaagctggagcaggacgtcgccgagctgaagaggaaagacgaagagatgaag
aagttctcacacacagaagatcacactcgttttctgatcaagtacccaacgttggcaagt
ctcaatgaatccacagacccgccccccgtcaaagcccgtcgcgtggggtatttcgagaaa
gtttcaatggctctgtccgaggccaaggtgaacttacgtgtgattgttggggaagaatac
gcaaaggtctccatgacagtaactggggttataacatcaaatactaaagaagagcccttc
accagagccgacttcttacactatgcatgccaagtaactctggatccaaacacggccaac
acacatctgaagatatccgggaacgacaaaatggtagccttcgtcagtgatgaacagaag
tatcctcttcatccggagaggtttgtttattgctggcagctcctgagtaaaggcagtctg
gacggtcgtagttactgggaggtggagttgagcgggacaggagcttttgtagcagtggtg
tacaaagacattagtagattagggggcttcactgaaagcatgtttgggtacaacgacaag
tcttgggcgttggattgttacaaaaacacctgcacgttcaggcatgacaacgttagaact
cgcatcccgggcatgtggtcgtccagagtgggagtttacctggatcctgacgcaggagtc
ctgtccttctacagcgtctctgaaaccaggaccctcctccatagagtccagactaaattc
actcagccgctctacgccggactctggctttcagacggagcgtctgccgaggtgtgtcgg
atcaggtag
DBGET
integrated database retrieval system
