Trematomus bernacchii (emerald rockcod): 117500305
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Entry
117500305 CDS
T09643
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117500305
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117500305
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
Prok-RING_4
zf-RING_6
Gp58
CENP-F_N
RSS_P20
MRP-S31
Motif
Other DBs
NCBI-GeneID:
117500305
NCBI-ProteinID:
XP_034009017
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MAHGGVQLDRETFSCSICLDLLKDPVTIPCGHSYCMDCIKHHWDGEIIHSCPQCRKSFTP
RPVLLKSTMLADLVEELKKTGLQAAPADHCYAGAEDVACDVCTGRKLRACKSCLVCLASY
CDKHLQPHYDAATFKKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQCICYLCSLDEHKG
HDTVSAEAERTERQRELEGSRLNIQQRIQDREKEVKLLQQEVEAVNGSADKAVEDSEKMF
TELIRLMEKRSSDVKQQVRSQQKSEVSRVKELQEKLEQEISELKRRDAELKLLSHTEDHN
QFLHSYPSLSALSEPTHSSSINIRPLSYFEDVTLSAVRDKLQDVLREEWTNVSPTEVDVL
LSAAEPTTRAGFLQYSQEITLDPNTANTLLVLSEGSRKATYMEQYQGYSRHPDRFTEWPQ
VLSRESLTGRCYWEVELRGRAVYVHVAVTYKNISRAGDGTESLFGFNDKSWSLECNQNSY
TFSYNSIYTPVSGPLSSRVGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQPLHAGVCLY
YPHGDTAEFCKLK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcgcatggaggagttcagctggaccgggaaaccttctcttgttcgatctgtctggat
ctactgaaggatccggtcactattccctgtggacacagctactgcatggactgtatcaaa
caccactgggatggagagataatccacagctgccctcagtgtagaaagagcttcacaccg
aggcctgtcctgctgaaaagcaccatgttagcagatttagtggaggagctgaagaagact
ggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtggcctgtgat
gtctgcactgggagaaaactgagagcctgtaagtcctgtctcgtgtgtctggcctcttat
tgtgacaaacacctccagcctcattatgacgcagctacgtttaaaaaacacaagcttgtg
gagccctccaagaagctccaggagaacatctgctctcgtcacgacgaggtgatgaagatg
ttctgccgcactgatcagcagtgtatctgttatctctgctctttggacgaacacaaaggc
cacgacacagtgtcagctgaagcagagaggactgagaggcagagagagctggaggggagt
cgactaaacatccagcagagaatccaggacagagagaaggaggtgaagctgcttcagcag
gaggtggaggccgtcaatggctctgctgataaagcagtggaggacagtgagaagatgttc
actgagctgatccgtctcatggagaaaagaagctctgatgtgaagcagcaggtcagatcc
cagcagaagagtgaagtgagtcgagtcaaagagcttcaggagaagctggagcaggagatc
tctgagctgaagaggagagacgctgagctgaagctgctgtctcacacagaggatcacaac
cagtttctgcacagctacccctcactgtcagccctcagtgaacctacacactcatccagc
atcaacatccgtcctctgagctactttgaggacgtgacgctgtcagcagtcagagacaaa
ctacaggacgtcttgagagaggaatggacaaacgtctcaccgactgaagtggatgtttta
ctgtcagcagcagagcccaccaccagagctgggttcttacaatattcacaggagatcact
ctggatccaaacacagcaaacacactgctggtattatctgaggggagcagaaaagcaaca
tacatggaacaatatcagggttattctcgtcacccagacagattcactgaatggcctcag
gtcctgagtagagagagtctgactggacgttgttactgggaggtggagttgagagggaga
gcagtttatgtacatgtagcagtcacatacaagaatatcagcagagcaggggatgggact
gaaagtttatttggattcaatgacaaatcttggtccttagagtgtaaccaaaacagttat
acatttagttacaacagtatctacactcccgtctcaggtcctctgtcctccagagtagga
gtgtacctggatcacagagcaggtattctgtccttctacagcgtctctgaaaccatgact
ctcctccacagagtccagaccacattcactcagccgctacatgctggagtttgtctttat
tatcctcatggagacacagctgagttttgtaaactgaaatag
DBGET
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