Trematomus bernacchii (emerald rockcod): 117500353
Help
Entry
117500353 CDS
T09643
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117500353
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117500353
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
U-box
Prok-RING_4
Gp58
zf-RING_6
PRP1_N
zf-RING_11
Fib_alpha
Exonuc_VII_L
WDCP
Motif
Other DBs
NCBI-GeneID:
117500353
NCBI-ProteinID:
XP_034009102
EnsemblRapid:
ENSTBNG00005014762
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MAQKRVQLDRETFSCSICMDLLKDPVAIPCGHSYCMRCIKGFWDRGDEKKIHSCPQCRQS
FTPRPVLLKNTMLAALVEELKKTGLQAAPADHCYAGAEDVACDVCTGRTLRARKSCLQCL
ASYCDQHLQSHYDVAPLKKHKLVEPSKKLQENICSRHDEVMRMFCRTDQQCICYLCTVDG
HKGHDTVSAAAERTERQRELEGSRENIQQRIQDREKEVKLLQQEVEAVNGSADKAVEDSE
KMFTELTRLMEKRSSDVKQQVRSQQKREVSRVKELQEKLEQEMAELKRRDAELKLLSHTE
DHNQFLHSYPSLSALSEPTHSSSINIRPLSYFEDVTAALSAVRDKLQDVLREEWTNVSPT
EVDVLLSAAEPTTRAGFLQYSQEITLDPNTAFTRLLLSEGSRKATFMRQHQSYSSHPDRF
TIYYPQVLSRESLTGRCYWEVELRGGGVCVAVAYKNISRAGIGTECGFGFNDKSWAFDCF
LNSYTLRFNSISTPVSGPLSSRVGVYLDHTAGILSFYSISETMTLLHRVQTTFTQPLHAG
VRLYGDVGTTAEFCKLK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaagagttcagctggaccgggaaaccttctcttgttcgatctgtatggat
ctactgaaggatccggtggctattccctgtggacacagctactgcatgaggtgtattaaa
ggcttctgggatcgaggggatgagaagaagatccacagctgccctcagtgtaggcagagc
ttcacaccgaggcctgtcctgctgaaaaacaccatgttagcagctttagtggaggagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagacgtg
gcctgtgatgtctgcactgggagaacactgagagcccgtaagtcctgtctgcagtgtctg
gcctcttattgtgaccaacacctacagtctcattatgacgtagctccattaaaaaaacac
aagctggtggagccctccaagaagctccaggagaacatctgctctcgtcacgacgaggtg
atgaggatgttctgccgcactgatcagcagtgtatctgttatctctgcacggtggacgga
cataaaggccacgacacagtgtcagctgcagcagaaaggactgagaggcagagagagctg
gaggggagtcgagaaaacatccagcagagaatccaggacagagagaaggaggtgaagctg
cttcagcaggaggtggaggccgtcaatggctctgctgataaagcagtggaggacagtgag
aagatgttcactgagctgacccgtctcatggagaaaagaagctctgatgtgaagcagcag
gtcagatcccagcagaagagggaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatggctgagctgaagaggagagatgctgagctgaagctgctgtctcacacagag
gatcacaaccagtttctgcacagctacccctcactgtcagccctcagtgaacctacacac
tcatccagcatcaacatccgtcctctgagctactttgaggacgtgacggcggccctgtca
gcagtcagagacaaactacaggacgtcctgagagaggaatggacaaacgtctcaccgact
gaagtggatgttttactgtcagcagcagagcccaccaccagagctgggttcttacaatat
tcacaggagatcactctggatccaaacacagcattcacacggctgttattatctgagggg
agcagaaaagcaacattcatgagacaacatcagtcttattctagtcacccagacagattc
actatttattatcctcaggtcctgagtagagagagtctgactggacgttgttactgggag
gtggagttgagagggggaggagtttgtgtagcagtcgcatacaagaatatcagcagagca
gggattgggactgaatgtggatttggattcaatgacaaatcttgggcttttgactgtttc
ctaaacagttatactttgcgtttcaacagtatcagcactcccgtctcaggtcctctgtcc
tccagagtaggagtgtacctggatcacacagcaggtattctgtccttctacagcatctct
gaaaccatgactctcctccacagagtccagaccacattcactcagccgctacatgctgga
gttcgtctttatggtgatgttggaaccacagctgagttttgtaaactgaaatag
DBGET
integrated database retrieval system
