Trematomus bernacchii (emerald rockcod): 117500356
Help
Entry
117500356 CDS
T09643
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117500356
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117500356
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-RING_5
zf-RING_2
U-box
MRP-S31
Gp58
RSS_P20
Motif
Other DBs
NCBI-GeneID:
117500356
NCBI-ProteinID:
XP_034009107
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MAQKGVQLDRETFSCSICLDLLKDPVTTSCGHSYCMKCIKGFWDGEDEKKIHSCPQCRQS
FTPRPVLLKNTMLAALVEELKKTGLQAAPADHCYAGAEDVACDVCTGRKRRACKSCLVCL
ASYCDKHLQCHYDVPPLKKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQCICYLCSVDE
HKGHNTVSAAAERTERQRELEGSRQNIQQRIQDREKEVKLLQQEVEAVNGSADKAVEDSE
KMFTELIRLMERRSSDVKQQVRSQQKSEVSRVKELQEKLEQEMAELKRRDAELKLLSHTE
DHNQFLHSYPSLSALSEPTHSSSINIRPLIYFGDMTAALSEVRDKLQDVLIEEWTNVSLT
EVDVLLSAAEPTTRARFLKYSQEITLDPNTAHTRLLLSEGSRKATYMEQDQSYSSHPDRF
TEWSQVLSRESLTGHCYWEVEWIGADVSVAVSYKNISRAGSGDEFGNNDKSWSLFCYHNY
YSFVYNSIKTHFSGPQSSRVGVYLDHRAGILAFYSISETMTLLHRVQTTFTQPLHAGVQL
VAFDYGDTFELCKLK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccgggaaaccttctcatgttcgatctgtctggat
ctactgaaggatccggtgacgacttcctgtggacacagctactgcatgaagtgtattaaa
ggcttctgggatggagaggatgagaagaagatccacagctgccctcagtgtaggcagagc
ttcacaccgaggcctgtcctgctgaaaaacaccatgttagcagctttagtggaggagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtg
gcctgtgatgtctgcactgggagaaaacggagagcctgtaagtcctgcctcgtgtgtctg
gcctcttattgtgacaaacacctccagtgtcattatgacgtacctccattaaaaaaacac
aagctggtggagccctccaagaagctccaggagaacatctgctctcgtcacgacgaggtg
atgaagatgttctgccgcactgatcagcagtgtatctgttatctctgctctgtggacgaa
cacaaaggccacaacacagtgtcagctgcagcagaaaggactgagaggcagagagagctg
gaggggagtcgacaaaacatccagcagagaatccaggacagagagaaggaggtgaagctg
cttcagcaggaggtggaggccgtcaatggctctgctgataaagcagtggaggacagtgag
aagatgttcactgagctgatccgtctcatggagagaagaagctctgatgtgaagcagcag
gtcagatcccagcagaagagtgaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatggctgagctgaagaggagagacgctgagctgaagctgctctctcacacagag
gatcacaaccagtttctgcacagctacccctcactgtcagccctcagtgaacctacacac
tcatccagcatcaacatccgtcctctgatctactttggggacatgacggcggccctgtca
gaagtcagagacaaactacaggatgtcctgatagaggaatggacaaacgtttcactgact
gaagtggatgttttactgtcagcagcagagcccaccaccagagctcggttcttaaaatat
tcacaggaaatcacactggatccaaacacagcacacacacggctgttattatctgagggg
agcagaaaagcaacatacatggaacaagatcagtcttattctagtcatccagacagattc
actgaatggtctcaggtcctgagtagagagagtctgactggacattgttactgggaggtg
gagtggataggggcagacgtttctgtcgcagtctcatacaagaatatcagcagagcaggg
agtggggatgaatttggaaacaatgacaaatcttggtccttgttttgttaccataactat
tattcattcgtttacaacagtatcaaaactcacttctcaggtcctcagtcctccagagta
ggagtgtacctggatcacagagcaggtattctggccttctacagcatctctgaaaccatg
actctcctccacagagtccagaccacattcactcagccgctacatgctggagtgcagctt
gttgcttttgattatggagacacatttgagttgtgtaaactgaaatag
DBGET
integrated database retrieval system
