Trematomus bernacchii (emerald rockcod): 117500359
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Entry
117500359 CDS
T09643
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117500359
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117500359
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_2
zf-RING_5
zf-RING_6
zf-RING_11
Gp58
MRP-S31
Phasin_2
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
117500359
NCBI-ProteinID:
XP_034009110
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MAQKRVQLDRETFSCSICMDLLKDPVAIPCGHSYCMKCIKAHWDKEDEKKIHSCPQCRQS
FTPRPVLLKNTMLAALVEELKKTGLQAAPADHCYAGAEDVACDVCTGRTLRACKSCLQCL
ASYCDQHLQSHYDVAPLKKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQCICYLCTVDG
HKGHDAVSAAAERTERQRELEGSRQNIQQRIQDREKEVKLLQQEVEAVNGSADKAVEDSE
KMFTELIRLMEKRSSDVKQQVRSQQKREVSRVKELQEKLELEQEMAELKRRDAELKLLSH
TEDHNQFLHSYPSLSALSEPTHSSSINIRPLSYFEDVTAALSAVRDKLQDVLREEWTNVS
PTEVDVLLSAAEPTTRAGFFKYSQEITLDPNTAYTYLLLSEGSRKATYMKQHQSYSSHPD
RFTAWPQVLSRESLTGRCYWEVEWRGEGVSAAVAYKNIRRAGGGGGFGYNDKSWSLECNQ
NSYSFHYNRISTPVSGPRSSRVGVYLDHRAGILSFYSVSETMTLLHRVQTKFTQPLHVGV
LLCDDGATAEFCKLK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaagagttcagctggaccgggaaaccttctcttgttcgatctgtatggat
ctactgaaggatccggtggctattccctgtggacacagctactgcatgaagtgtattaaa
gcccactgggataaagaggatgagaagaagatccacagctgccctcagtgtaggcagagc
ttcacaccgaggcctgtcctgctgaaaaacaccatgttagcagctttagtggaggagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagacgtg
gcctgtgatgtctgcactgggagaacactgagagcttgtaagtcctgtctgcagtgtctg
gcctcttattgtgaccaacacctccagtctcattatgacgtagctccattaaaaaaacac
aagctggtggagccctccaagaagctccaggagaacatctgctctcgtcacgacgaggtg
atgaagatgttctgccgcactgatcagcagtgtatctgttatctctgcacggtggacgga
cataaaggccacgacgcagtgtcagctgcagcagaaaggactgagaggcagagagagctg
gaggggagtcgacaaaacatccagcagagaatccaggacagagagaaggaggtgaagctg
cttcagcaggaggtggaggccgtcaatggctctgctgataaagcagtggaggacagtgag
aaaatgttcactgagctgatccgtctcatggagaaaagaagctctgatgtgaagcagcag
gtcagatcccagcagaagagagaagtgagtcgagtcaaagagcttcaggagaagctggag
ctggagcaggagatggctgagctgaagaggagagacgctgagctgaagctgctgtctcac
acagaggatcacaaccagtttctgcacagctacccctcactgtcagccctcagtgaacct
acacactcatccagcatcaacatccgtcctctgagctactttgaggacgtgacggcggcc
ctgtcagcagtcagagacaaactacaggacgtcctgagagaagaatggacaaacgtctca
ccgactgaagtggatgttttactgtcagcagcagagcccaccaccagagctgggttcttc
aaatattcacaggagatcactctggatccaaacacagcatacacatatctgttattatct
gaggggagcagaaaagcaacatacatgaaacaacatcagtcttattctagtcatccagac
agattcactgcatggcctcaggtcctgagtagagagagtctgactggacgttgttactgg
gaggtggagtggagaggggaaggagtttctgcagcagtcgcatacaagaatatcaggaga
gcagggggtgggggtggatttggatacaatgacaaatcttggtccttagagtgtaaccaa
aacagttattcatttcattacaacagaatcagcactcccgtctcaggtcctcggtcctcc
agagtaggagtgtacctggatcacagagcaggtattctgtccttctacagcgtctctgaa
accatgactctcctccacagagtccagaccaaattcactcagccgctacatgttggagtt
ttgctttgtgatgatggagccacagctgagttttgtaaactgaaatag
DBGET
integrated database retrieval system
