Trueperella bernardiae: QPC17_05055
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Entry
QPC17_05055 CDS
T09150
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
tber
Trueperella bernardiae
Pathway
tber00521
Streptomycin biosynthesis
tber00523
Polyketide sugar unit biosynthesis
tber00541
O-Antigen nucleotide sugar biosynthesis
tber01100
Metabolic pathways
tber01110
Biosynthesis of secondary metabolites
tber01250
Biosynthesis of nucleotide sugars
Module
tber_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
tber00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
QPC17_05055 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
QPC17_05055 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
QPC17_05055 (rfbC)
Enzymes [BR:
tber01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
QPC17_05055 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Cupin_1
Motif
Other DBs
NCBI-ProteinID:
WIM07134
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All DBs
Position
complement(1089322..1089873)
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AA seq
183 aa
AA seq
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MEIIEPAMQATAIEGLYVITPKQVTDERGTIRELVRRSWLEERGLVSSFAQANNTLTHKG
AVRGLHAEAMTKLVTVVFGRVFGAYVDIREGSATRGQVVTVEITPGTMVLVPQGVCNGFQ
ALEESEYLYFFDREWTAGMPGSALAPLDPELGIEWPIPVDVDNRAMISEKDLNAPRYSAV
RGA
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
gtggaaattattgaaccggccatgcaggccacggccattgagggcctttacgtcatcacg
ccgaagcaggtcacggacgaacgcggcacgatccgtgagctagtgcgcaggtcctggctg
gaggagcgcgggctggtgagctcgtttgcccaggcgaacaacacgctcacgcacaagggg
gccgtgcgcggccttcacgcggaggcgatgacgaagctggtcacggtggtcttcgggcgg
gtcttcggcgcctacgtggacatccgcgagggctcggccacgcggggccaggtggtgacc
gtggagatcaccccgggcacgatggtgctggtcccgcagggcgtatgcaacggcttccag
gcgctggaggagtcggagtacctctacttcttcgaccgggagtggacggcggggatgccg
ggctcggcgctggccccgcttgatccggagctgggcatcgagtggccgatcccggtcgac
gtcgataaccgggcgatgatctcggaaaaggacttgaacgccccgcggtattccgcggtg
aggggagcgtag
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