Trypanosoma brucei gambiense: TbgDal_VI3340
Help
Entry
TbgDal_VI3340 CDS
T06526
Name
(RefSeq) ATP-dependent DEAD/H DNA helicase recQ, putative
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TbgDal_VI3340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbg03019
]
TbgDal_VI3340
03400 DNA repair and recombination proteins [BR:
tbg03400
]
TbgDal_VI3340
Enzymes [BR:
tbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TbgDal_VI3340
Messenger RNA biogenesis [BR:
tbg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TbgDal_VI3340
DNA repair and recombination proteins [BR:
tbg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TbgDal_VI3340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
FRP
Motif
Other DBs
NCBI-GeneID:
23861988
NCBI-ProteinID:
XP_011774141
UniProt:
C9ZR26
LinkDB
All DBs
Position
6:complement(836243..838987)
Genome browser
AA seq
914 aa
AA seq
DB search
MQNSYEEILFDDVASDNTPSEGETLTPVNVELVHDEKNNTEEEKEEEEYLMRVPFLAPRR
ASTFCNTPPSDHRNNSNGLTVCHVAHSVPQDENPVGLPANAAFPMNCIRKGVDEDDKSIL
QVTLERLFKETPRSNTSTIPICSYLLQNHLGVSSGEFREGQQEAVLAILQGESTLAVFPT
GWGKTLCFQVPILVHRLLFQQKLMLWKQKQLENVSLPEYTAPCSRFGVVVSPLLSLMADQ
VERITKDGSLKAVILSSATSGARDKDLLESLSSPVCNIDLVFLSPEKIVRHRELRQVLKG
QVHRIAFICIDEAHCVSQWAYDFRPSFLYVHRVLEDIVLGGDFSPPFLCLTATATPSVID
DLQSTFNIRRTVVVPYQRANLQLEAVSLLSENVTKDSPPTHSDLREKLLQTVLELPKPML
VYVQTRADADELAKFLSSKLGAAQNGKARKKGDTTRSLLFTSATHEKIQNGTVENITSGV
EGRPLVIQSYHAALERHARTKCQNQFMHDRIDVLIATVAFGMGIDKPNIRSVVHASVPSS
IESYVQETGRAGRDGKLSICRLLYNPYDFYALRSRLLSSLVSPTEMLSVVTHILSSPVTR
FGDKLIVVSVSKISEELMMSEETVETVLFMMLTLESGVLTACHGTSPTGYRVIRWSTEIN
TTTTNGKRKRDRDVQSGVGSALAQLEALDGVFETCRNNKRMESVVNAANALNMSLSDFNF
RLDDLSASGFVSLQKLPTGYVITVGDRFVEVSSPTARQELATRLWSLYNNRLESLVKSLE
LTFAVLRCPTHESVRAGLEWDPRRNLSSEFLLQKEGIPCWQAPRRSLTKVDAVMTLNDFV
EKNRTRINGSYEAARALLGVLPKSLTSRGKYAGELPLALSWYVRSPHFGLLREFDLQLIL
KLLTPHNLDEKEET
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatagttatgaagagattcttttcgacgatgtagctagcgacaacacaccttct
gaaggggaaaccttaacccctgttaatgtggagctcgtacacgatgaaaagaataataca
gaagaagaaaaggaggaagaggagtatttgatgcgtgttccgtttttggcgccacgtcga
gcatcaactttctgcaacactcctccttcagaccatagaaataacagcaatggactcaca
gtttgtcatgtcgctcattcagtgccacaagatgagaacccagttggactacctgccaat
gcggcttttcccatgaattgtattcgaaagggtgttgacgaggacgacaagagcattttg
caggttactttagaaagactgttcaaggaaactccacgttccaacacttcgacaataccc
atttgcagctacttgttacagaaccacttgggtgtgtcctcgggcgagttccgtgaagga
caacaagaggctgtgcttgccattttgcaaggggaaagcactcttgctgtctttcccact
ggctggggaaagacgctctgctttcaggtgccaattcttgttcacagactgctctttcag
cagaagctcatgttgtggaaacagaagcaattagaaaatgtatcgttaccggaatatacg
gcgccgtgctcccgatttggtgtggtcgtttctcccttgctgtcgttaatggccgatcag
gttgaaaggattacgaaggatggctccttgaaggcagttattctttcctcagctacctcg
ggtgcacgtgataaagatctcttggaaagtttgtcttccccagtgtgtaatattgacttg
gtttttctatcacctgaaaagattgtacgtcaccgtgagcttcggcaagtactgaagggt
caagttcaccgtatcgcattcatatgcattgatgaggcccattgtgtttcccaatgggcg
tatgattttcgaccatccttcctgtacgttcatcgtgtgcttgaagatatagtcttggga
ggagatttttctcccccatttctttgtctcacagcaacggcaacgccatcagtaatcgat
gatttgcagtcgacattcaatattaggcgaacagtcgttgtaccctatcagcgagcaaac
ctccaattggaggcagtttctctcctgagcgaaaacgtaacgaaggactctcctcccact
cacagtgatttgcgggagaagctgttgcagacagtgctcgagcttccaaaaccgatgctt
gtgtacgtacaaactcgggccgacgccgatgaactggctaaatttctctcgtccaagctg
ggggctgcacaaaatggaaaagcgaggaaaaaaggggatacaacacgttctttattgttt
accagcgccactcatgaaaagatacaaaacggaacggtggaaaatatcacttccggtgtt
gaggggagacccctcgtaatccaaagttatcatgcagcactcgaacggcatgcccgaaca
aagtgccaaaatcagtttatgcatgatcggattgacgtactgattgcgactgttgcgttt
ggaatgggcattgataagccaaatattcgttctgtggttcacgcgtcggtgccaagctca
atagaaagctacgtccaagaaactggtcgcgctggacgtgatggcaaattatccatttgc
agacttttgtacaacccatacgacttttatgcactgcgctctcgcctgctttcctccctg
gtgtcccccacggagatgctgtcggttgtgactcacattctctccagccccgttactagg
tttggagacaaacttatcgtggtgtctgtgtcaaagatttcggaagagctaatgatgagc
gaagagacggtggaaactgttcttttcatgatgcttacactggaaagtggagtcttgacc
gcatgccatggaacgtcaccaactggttatcgtgtcatccgttggtctactgaaatcaac
acaacaacaacaaatggaaagcgcaagcgggatcgggacgttcaatcgggtgtcggcagc
gcattggctcagctcgaggcgttagatggtgttttcgagacgtgtcgaaacaacaagcga
atggagagtgttgtgaatgcagcgaatgcgttgaatatgtctctcagtgattttaatttt
aggcttgatgacctctccgcctcgggattcgtgtcactgcagaaactgccgacaggttat
gtcataacggttggggatcgcttcgttgaggtttcttcacccactgctcggcaagagcta
gcaacgcgcctatggtcgctgtataacaaccgccttgagtctctcgtcaaatctctcgaa
ttgacatttgccgtgttgcggtgcccaacgcatgagagtgtgcgggcaggacttgaatgg
gatccgagacgcaacttatcgtctgagtttcttttgcaaaaggaaggaattccgtgctgg
caggcgccgcggcgtagtttgaccaaagtggatgctgtaatgacattaaatgactttgtg
gagaagaaccgcacgcgaattaacggttcttatgaggccgctcgggcattacttggcgtt
ctgccgaagagtctaacaagtcgcggcaaatatgccggtgaacttcctcttgctctgagt
tggtatgtgcgttctccccacttcgggttgctgagggagtttgatttgcagttgatttta
aagttacttacaccacacaacttggacgaaaaggaagaaacgtag
DBGET
integrated database retrieval system
