KEGG   Trypanosoma brucei gambiense: TbgDal_X2000
Entry
TbgDal_X2000      CDS       T06526                                 
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
tbg  Trypanosoma brucei gambiense
Pathway
tbg03082  ATP-dependent chromatin remodeling
tbg03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:tbg00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    TbgDal_X2000
   03083 Polycomb repressive complex
    TbgDal_X2000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tbg03036]
    TbgDal_X2000
Enzymes [BR:tbg01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     TbgDal_X2000
Chromosome and associated proteins [BR:tbg03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     TbgDal_X2000
   HDAC complexes
    Sin3A-HDAC complex
     TbgDal_X2000
    BRAF-HDAC complex
     TbgDal_X2000
    REST complex
     TbgDal_X2000
    SHIP complex
     TbgDal_X2000
    MiDAC complex
     TbgDal_X2000
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     TbgDal_X2000
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    TbgDal_X2000
  Chromatin remodeling factors
   NuRD complex
    TbgDal_X2000
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 23865255
NCBI-ProteinID: XP_011777385
UniProt: D0A1H7
LinkDB
Position
10:402904..404070
AA seq 388 aa
MNEDGDCRRVALIDTSCYSADCTLSALVPQHAMKPYRLLVTMELIASLGLKRFCRTVVPP
PIGIKELLTYHAEDYVLNLGLHSNRSWLWNTEVSKVTFSGDCPPVEGIVEYSLSTVSGSL
MAAVLLNSGAVDTAIHWGGGMHHAKCGECSGFCYVNDIVIAIIELLKCHDRVLYVDLDMH
HGDGVDEAFCRSRRVFTLSLHKFGESFFPGTGHPRDVGIGNGRHYTMNLAMWDGVDDFYY
TTVFERALRSIVKRFNPNVVVLQCGADSLAGDRLGHFNLSSWGHGKCVEEVKKLGLPMLV
VGGGGYTLRNVAKLWAYETSILCGKRLPLNTVIPLHRMPLSGWLFEESPQLLVSQDEENK
PLPGVNVQRSFRVIIEQIDKHCPNIMTV
NT seq 1167 nt   +upstreamnt  +downstreamnt
atgaatgaggatggtgattgtcggcgcgtcgctctcattgacacatcttgctattccgct
gattgtacgctctcagcgttggttcctcagcatgcaatgaaaccgtatagacttttggtg
acaatggaactaattgcatcactggggttaaagcggttttgtcggacggttgtcccgcca
ccaattggtattaaagagctgcttacctaccatgctgaagattatgtactgaatctggga
cttcatagtaaccgcagctggttgtggaatacagaggtatcgaaggttaccttttccgga
gattgtccacctgttgagggaattgttgaatattctctctcaacagttagtggctccctc
atggccgctgttttgctgaatagtggtgctgtcgatacagcgattcattggggtggtggt
atgcatcatgcaaaatgcggtgagtgttctggattctgttacgtgaatgatattgttatc
gccattattgagctactgaaatgccatgatagagttttatatgttgatcttgatatgcat
cacggagacggagtcgacgaagcgttttgccgtagcagaagagtctttactctttccctt
cacaagtttggcgagtccttttttccgggtacaggccatccacgggatgtaggcattgga
aacgggcgccactacactatgaacttagccatgtgggatggtgtggatgacttctactac
accacagtttttgagcgtgcgctcagatccattgtaaaacggttcaatccaaatgtagtt
gtcttgcagtgtggagccgattcgctcgcaggagatcgtttgggacattttaatctctcg
tcatggggtcatggaaagtgtgttgaagaggtaaagaaattagggctaccaatgcttgtg
gttggtggtggtggttacaccctgcggaatgttgccaagctgtgggcatacgaaactagc
atactctgtgggaaaaggctccccttgaacactgtcattcctctacatcgaatgcctctt
agtggatggctcttcgaagaatcgccacaacttttagtttcacaggatgaagaaaacaaa
cctcttcctggtgttaacgttcaacgatccttccgcgtgattattgagcaaatagacaag
cactgtccaaatataatgactgtttga

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