Trypanosoma brucei gambiense: TbgDal_X6340
Help
Entry
TbgDal_X6340 CDS
T06526
Name
(RefSeq) hypothetical protein, conserved
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
tbg
Trypanosoma brucei gambiense
Pathway
tbg03022
Basal transcription factors
tbg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TbgDal_X6340
09124 Replication and repair
03420 Nucleotide excision repair
TbgDal_X6340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tbg03021
]
TbgDal_X6340
03400 DNA repair and recombination proteins [BR:
tbg03400
]
TbgDal_X6340
Transcription machinery [BR:
tbg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TbgDal_X6340
DNA repair and recombination proteins [BR:
tbg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TbgDal_X6340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
23865732
NCBI-ProteinID:
XP_011777813
UniProt:
D0A2Q5
LinkDB
All DBs
Position
10:1238781..1240283
Genome browser
AA seq
500 aa
AA seq
DB search
MNPSYLNQILSYPQRESLISECPALALLCYQELVAAFRKGKRIADPLSLRDDVTVLLSIG
SLHELTDRIFSAAPHESDLPPLWCTLRKALECAWDPRGDGERQCELTMVGGKLRFYKKKC
DRMPLAQSSMRNALNMSRTRIREVIACALSGSLEPLGGRRNEPIAALLQFSRLIPPPSEE
RVVTSEGLAFCMQPLQQQWWTLVSVVLDRALAIMSGKGVSRATLWQLLAVLFALNTSDYV
YLFPSKDDDLEAFQLLARLSEVGLVYPLICNGEKCFVLSPHFHHAICWSSTPSLCTAALL
DDTRGPSSRLRREDEDTIITETNFRLYAYTKNPDMLRILDQFAVKEVDVVGMVVCYRVTR
ASFASALAKGIGANHILQFLTVKAHPSMIKQSNSEAGDPSCPVLPAASAGFGNTSEYRQG
NIIPQSFCDQLFTWERECRRLIFRHDVVLLKNIGKEQMEIILNCLSNSGEQHAVVHRESG
TLVIEQEVYTRVLSNFITPD
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgtcctatttgaatcagatattgagttaccctcaacgcgaatcgctaatttcg
gagtgccccgcgcttgcactcctctgctatcaggaattagtggctgccttccgcaaaggg
aaacgcattgctgatccgctgtctttgagggatgatgtcacagtcctactttccattgga
tcgttgcatgaactgacggaccggattttctcagccgcaccgcatgaatccgatttgcct
cctctctggtgtacacttcggaaggctcttgagtgtgcctgggaccccagaggtgatggt
gagcgacaatgtgaactaacgatggtgggtgggaaactccgattttacaagaaaaaatgt
gataggatgccgcttgcacagtcatcgatgcggaacgcacttaatatgagtagaacacgc
attcgagaagttattgcctgtgccctatcgggttcactggagcctcttggagggagacgt
aacgagcctatcgctgcattacttcagttttcccgcctgatcccaccaccgtcggaagag
cgggtcgtcacctctgaaggattggcgttttgcatgcagccccttcaacaacagtggtgg
acattagtatctgttgtgttagatcgcgcgctggccataatgtcgggtaaaggagtctca
cgcgccactctttggcagcttctagctgttctgtttgcacttaacacaagtgattatgtt
tacttgtttccttcaaaggatgatgaccttgaggcctttcaactgctggcgcgcctctcg
gaggtcgggttggtttacccccttatttgtaacggagagaaatgctttgtgctttctccc
cacttccaccacgccatatgttggagttctacaccatcgctttgcacagcggcattgctg
gacgacacgaggggtccatcatctcgtctacggcgggaggatgaagatactatcatcact
gaaacaaattttcgactatacgcatacacgaaaaatcctgacatgctgcgcattcttgat
caatttgcggtaaaggaagtggatgtggtgggaatggttgtatgctacagggtgacacga
gcatcatttgcaagtgcactagcgaaaggcataggcgcaaaccatatattgcaatttctt
acggtgaaggcacatccttctatgatcaagcagagcaatagtgaggctggtgacccgtcg
tgcccggttctccccgctgcttctgcgggattcggtaacacatctgaatatcgtcaggga
aatattataccacaatccttttgtgatcaactgttcacgtgggagagggaatgccgaaga
ctaatttttcgtcacgatgtggtgctgttgaaaaatatcgggaaagagcagatggaaata
atcttaaactgtctttcaaatagtggggaacagcacgccgtggtgcatcgcgagagcggt
actttggtcattgaacaggaggtttacacgcgtgtactgtccaatttcattactccggat
taa
DBGET
integrated database retrieval system
