Tetrapisispora blattae: TBLA_0B05540
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Entry
TBLA_0B05540 CDS
T02489
Symbol
TBLA0B05540
Name
(RefSeq) hypothetical protein
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
tbl
Tetrapisispora blattae
Pathway
tbl03013
Nucleocytoplasmic transport
tbl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tbl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TBLA_0B05540 (TBLA0B05540)
03015 mRNA surveillance pathway
TBLA_0B05540 (TBLA0B05540)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbl03019
]
TBLA_0B05540 (TBLA0B05540)
Enzymes [BR:
tbl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
TBLA_0B05540 (TBLA0B05540)
5.6.2.5 RNA 5'-3' helicase
TBLA_0B05540 (TBLA0B05540)
Messenger RNA biogenesis [BR:
tbl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
TBLA_0B05540 (TBLA0B05540)
mRNA cycle factors
Common to processing body (P body) and stress granule
TBLA_0B05540 (TBLA0B05540)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
UvrD-helicase
DEAD
SLFN-g3_helicase
AAA_22
PhoH
Helicase_RecD
nSTAND3
DUF4088
AAA_16
T2SSE
Flavi_DEAD
AAA
Motif
Other DBs
NCBI-GeneID:
14493854
NCBI-ProteinID:
XP_004178901
UniProt:
I2GZ30
LinkDB
All DBs
Position
2:complement(1321145..1324315)
Genome browser
AA seq
1056 aa
AA seq
DB search
MSNVHETDALFNPGANEINTSDYDSQKEFVDDLDDIISKQTSNSEINDGSKINDNIFKSE
TNSPVADKIFSAIPESELPVAANDDEEEDDIDSEGDIYNDEEFDALNGTNLKDLTNVVNA
NEDALMNVSDHACAFCGIDKPASVIKCNTCKKWFCNGKNGTNSSHIVNHLVLSHHNVVSL
HPESDLGDTILECYNCGCRNAFILGFVSAKSDAVVVLLCRVPCAQTKNANWDTDQWQPLI
ENRQFLSWIAEEPSDEEKLNARLITPSQISKLEAKWRSNKDATINDIDLPEQQEEIPPVL
LRYQDAYEYQRSYGPLIKLEADYDKQLKESQALEHISVTWSLALNNRHLVSFALSTFESN
ELKVAVGDEMIIRYSGVQYPEWEGRGYIVRLPNSFQDEFTLELKPNKEPPPTHLGTGFTA
EFIWKGTSYDRMQDALKKFAIDKKSISGYLYYKILGHQVVDIAFDISMPSEFSIPKFAQL
NSSQTNAVRNVLQKPLSLIQGPPGTGKTVTSATIIYHLSKLHSERILVCAPSNVAVDHLA
TKLRDLGLKVVRLTAKSREDVESSVSDLALHNLVARSSKGELRKLLRLKEEVGELSANDT
KKFVKLVRKTESEILKKADVVCCTCVGAGDKRLDTKFRTVLIDESTQASEPECLIPIVKG
AKQVILVGDHQQLGPVILERKAGDAGLKQSLFERLISLGHVPIRLEVQYRMNPFLSEFPS
NMFYEGSLQNGVTLDQRTVPTSTFPWPIHDVPMMFWANYGREEISANGTSYLNRIEAMNC
ERVITRLFKDGVKPEQIGVITPYEGQRAYILQYMQMNGTLDKDLYINVEVASVDAFQGRE
KDYIILSCVRANEQQAIGFLSDPRRMNVGLTRAKYGLVVLGNPRSLSRNILWNHLLIHFR
QKGCLVEGSLDNLQLCTVQLTRNRQNRQRQTRFPFNMGQTQLDSAIPSVQEFDTQSMMAF
GSNTGTFDNPFAASSELSSYLNNNYWNLPNFAVSNQKNTTVQNTQNNYDKNLASNFDSSL
ARKLENYDAVPEFQQYGNFEEYSTENLDKNFSSLNI
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgtacacgaaacagatgctttgttcaacccaggtgctaatgagataaatact
tcagattatgattcccaaaaggaatttgtagatgatttagatgatatcatctcaaagcaa
acatcaaattctgaaattaatgatggatctaaaataaacgacaacatttttaaatcagaa
actaattctcctgttgctgataaaattttctcagccatcccagaatctgaacttcctgtt
gctgctaatgatgatgaagaagaagatgatatcgattctgagggagatatttataatgat
gaggaatttgacgctttaaatggcactaatcttaaggacttaacaaatgttgtcaatgct
aacgaagatgctctgatgaatgtatctgatcatgcctgtgccttttgtgggattgataaa
ccagcctctgtcatcaaatgtaacacttgtaaaaaatggttctgtaatggtaaaaatggt
accaacagttctcatatcgttaatcatttggttttatcacatcataatgtagtatcatta
catccagaatcagatctgggagacaccattttggaatgttacaattgtggttgtagaaat
gccttcatattaggttttgtttctgcaaaaagtgacgcagttgttgttttattatgtcgt
gtaccttgtgcacaaacaaaaaatgcaaattgggatactgatcaatggcagccattgatt
gaaaacagacaatttttatcttggattgctgaagaaccttctgatgaagaaaaattaaat
gctagactgattactccttctcaaatttcaaaattagaggccaaatggagatcaaataaa
gatgctactattaatgatattgatttacctgaacaacaagaagaaatacctccagtttta
ttgagatatcaagatgcatatgaatatcaaagatcatatggtcctttaattaaattagag
gctgattatgataaacaattaaaggaatcgcaggcattagaacatatttctgtaacctgg
tcattagctttaaataatagacacttggtttcttttgcattatctacttttgaatcaaat
gagctaaaagtagcagttggtgatgaaatgattatcagatactcgggtgttcaataccca
gaatgggaaggtagaggttatattgtgcgtttaccaaatagttttcaagatgaatttaca
ttagaactaaagccaaacaaagagcctcctccaactcatttaggtacaggtttcactgct
gaatttatttggaaaggaacttcttatgatagaatgcaggatgccttaaaaaaatttgct
attgacaaaaaatccatatctggttacctttattataagattttagggcatcaagttgtt
gatattgcatttgatatttcaatgccatcagagttttcaattccaaaatttgctcaattg
aattcttctcaaacaaatgctgttagaaatgttttacaaaaaccattatctttaatacaa
ggtcctcctggtacaggtaaaactgttacttctgcaacgattatttatcatttatcaaag
ttgcattcggaacgtatcttagtttgtgctccatctaacgtagctgtcgatcatttagcc
acaaaattgcgtgatttaggattaaaagtagtaagactaacagctaaaagtagagaagat
gttgaaagttccgtttcagatttagctttacataatttagtcgcaagatcgtcaaagggc
gaattacgaaaactattgagattgaaagaagaagtaggtgagttatccgcaaatgatacg
aaaaagtttgtcaaattggttagaaaaactgaatctgaaattttgaaaaaggcagatgta
gtttgttgtacctgtgtaggtgcaggcgataagcggttagatacaaaatttagaacagtt
ctgattgatgaaagtactcaagcctcagaaccagaatgtttaattccaattgttaagggt
gctaaacaagtaattctcgttggtgatcaccaacaactaggtcctgttatcttagagcgt
aaggctggtgatgctggtttaaagcaatctttatttgaaagattaatctctctagggcat
gttcctattcgtttagaggtccagtatcgtatgaatccatttttaagtgaattccctagt
aatatgttttacgaaggtagtttgcaaaatggtgtaacattagaccaaagaactgttcca
actagtacttttccttggcctatccatgatgttccaatgatgttttgggccaattatggg
agagaagaaatatcagcaaatggtacctcttatttgaatagaattgaagcaatgaattgt
gaacgtgttatcactagacttttcaaagatggtgttaagcctgaacaaattggtgttatt
actccatatgaaggccaacgagcatatattttacaatatatgcaaatgaacggtactttg
gataaagacttatacattaatgttgaggttgcttctgttgatgctttccagggtcgtgaa
aaagattatattattttatcttgtgttcgtgctaatgagcaacaggcaattggtttccta
agcgatccaagacgtatgaatgttggtttaacccgtgctaaatatggtttggtcgtactt
ggtaacccgcgatcattatcaagaaatattctttggaatcatttattgattcattttagg
caaaagggttgtttagtagaaggttcattagataatttacaattgtgtactgttcaacta
acaagaaatcgtcaaaataggcaacgtcaaacccgttttccatttaatatggggcaaact
cagctggatagtgcaataccaagcgtccaagaatttgatactcaaagcatgatggctttc
ggttcaaatactgggacttttgataatccgtttgcagctagtagcgagttatcatcttat
ctaaacaataattattggaatttgcctaactttgctgtctcaaatcaaaaaaatacaacg
gtgcaaaatactcagaataattatgataagaatctggcctctaatttcgattctagttta
gcaagaaagttagaaaattatgatgctgtccctgaatttcagcaatatggaaattttgaa
gaatacagcactgaaaatctagataaaaattttagctccttaaatatatag
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integrated database retrieval system
