Tetrapisispora blattae: TBLA_0E02050
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Entry
TBLA_0E02050 CDS
T02489
Symbol
TBLA0E02050
Name
(RefSeq) hypothetical protein
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
tbl
Tetrapisispora blattae
Pathway
tbl03030
DNA replication
tbl03410
Base excision repair
tbl03420
Nucleotide excision repair
tbl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TBLA_0E02050 (TBLA0E02050)
03410 Base excision repair
TBLA_0E02050 (TBLA0E02050)
03420 Nucleotide excision repair
TBLA_0E02050 (TBLA0E02050)
03430 Mismatch repair
TBLA_0E02050 (TBLA0E02050)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbl03032
]
TBLA_0E02050 (TBLA0E02050)
03400 DNA repair and recombination proteins [BR:
tbl03400
]
TBLA_0E02050 (TBLA0E02050)
Enzymes [BR:
tbl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
TBLA_0E02050 (TBLA0E02050)
6.5.1.6 DNA ligase (ATP or NAD+)
TBLA_0E02050 (TBLA0E02050)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
TBLA_0E02050 (TBLA0E02050)
DNA replication proteins [BR:
tbl03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
TBLA_0E02050 (TBLA0E02050)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
TBLA_0E02050 (TBLA0E02050)
DNA repair and recombination proteins [BR:
tbl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
TBLA_0E02050 (TBLA0E02050)
NER (nucleotide excision repair)
Other NER factors
TBLA_0E02050 (TBLA0E02050)
MMR (mismatch excision repair)
Other MMR factors
TBLA_0E02050 (TBLA0E02050)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
Motif
Other DBs
NCBI-GeneID:
14496331
NCBI-ProteinID:
XP_004180777
UniProt:
I2H4F6
LinkDB
All DBs
Position
5:498038..500200
Genome browser
AA seq
720 aa
AA seq
DB search
MSRYWLAARRPLSVTCRHYSCCRCRYYSFSPTLPLPMSKKQVTLARFFAKREPKDEEKQS
SSPVKEQVQIQGQPQQEQVKIQPQEQKQIVVPQEVTTSTQTPRPTKKSKPATSSLPYADL
CQLFETIESESSRLTITNLCTAFFSRTLQLDPSLLVPVTYLCINKLGPDYSGVELGLGEG
LLLKAIGSACGVSQQQLKLQYRKLGDLGQLAMSTRVLQPTITMFKLEPLTITKVFDTLAK
IAASQGKDSQNQKINMIKRLLTSCQGVEAKFLIRSLESKLRIGLAEKTVLTSLARALVIH
EKGNDNIQDDDYSNAEQIIKDSFCQIPNYEIIITTSLQYGVSQLASHIKLTPGIPLKPML
AKPTKSISEVLDTFQNIQFTSEYKYDGERAQVHLLPDGSMRIYSRNGEDMTQRYPELNIQ
DYLVDSTTTTQLILDCEAVAWDVELQKILPFQVLSTRKRKSVDLKDIKVRVCLFAFDILR
HNNDSLINNTLRERRDILHSITKPCPGQFQFATELTTSNLDELQTFLDKAIKDSCEGLMV
KSLDGTDSHYEPSKRSRNWLKLKKDYLQGMGDSLDLCVLGAYYGRGKRTGTYGGFLLACY
NQDTEEFETCCKIGTGFSDEMLQTLYNGLKETAIESPRANFVFDSSAEPDVWFNPTMVFE
VLTADLSLSPIYKAGSTVYGKGISLRFPRFIRIRTDKSVNDATSSEQVIDFYENQSHLQS
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgtcacggtattggctggcggctagacgtcctctctccgtcacgtgtcgccactacagt
tgctgtcgctgtcgctactattcttttagtcctacactaccgttacccatgagtaagaaa
caagtcactttggcaagattttttgccaagagagaacccaaagacgaagaaaaacaatca
tcatcaccagtgaaagaacaggtacaaatacaaggacaaccacaacaagagcaagtaaaa
atacaaccgcaagaacagaagcaaattgtagtgccgcaagaagtgacgacatcaacgcaa
actccgcgtcctacgaaaaaatcaaaacccgccacctcatcactaccttatgctgatctg
tgtcagttgtttgaaaccatcgaatctgaatcatctcgtcttaccatcacaaatttatgt
accgcttttttctctcgtacactacaacttgacccatctttactagtgcctgtcacttac
ttgtgtatcaataaattgggccccgactattcaggtgtagaattaggtcttggtgaaggt
cttctattaaaagccatcggttctgcatgtggtgtttctcaacaacaattgaaattacaa
tatagaaaattaggtgatttgggtcagcttgccatgtctactagagtattgcaaccaacc
atcaccatgtttaaattagaaccattaaccattacaaaagtattcgataccttagcaaaa
attgctgcttctcaaggtaaagactctcaaaatcaaaaaattaatatgattaaacgttta
cttacctcatgtcaaggtgtagaggccaaattcttgatccgttcattagaatccaaatta
agaatcgggttggctgagaaaactgtcttgacttcactagcgagagctcttgtcattcat
gaaaagggaaacgacaatatacaagacgatgactattctaatgcagaacaaatcatcaag
gattcattttgtcaaatccccaattatgaaattatcatcaccacttcattacaatacggt
gtttcacaattagcttcacatataaaattaactccagggatcccattgaaaccaatgttg
gcaaagcctacaaaatccatctccgaagtattggatacattccaaaatatccaattcact
tcagaatataagtatgacggtgaaagagctcaagtgcatttgttacctgatggctccatg
cgtatctattccagaaacggtgaagatatgactcaaaggtatccagaattaaatatccaa
gattatctggtagactctactaccacaactcaattaattttggattgtgaagctgtcgca
tgggatgtcgaattacaaaaaatcttacctttccaagtattaagtacacgtaagaggaaa
agtgtggatttgaaagacattaaagttagagtatgtttatttgcctttgatatattgcgt
cataacaatgattcattaattaacaacactttaagagaaagacgtgacattttacattca
attacaaaaccatgccctggtcaattccaattcgctacagaactaactacatcaaacttg
gatgaattacaaacgttcctggataaagctatcaaggattcttgtgaaggtcttatggtc
aaatccttggacggtacagattctcattatgagccaagtaagagatcaagaaactggctg
aaattgaaaaaagattatttacaaggtatgggggactcgctagatttatgtgtattgggt
gcctactacggtcgtgggaagagaacagggacatacggtggtttcttactcgcgtgttat
aatcaagatactgaagaattcgaaacttgttgtaagatcggtacagggttttccgacgaa
atgttgcagactctttacaatggtttgaaagagacagctatcgagtccccaagagctaat
tttgtttttgattcttcagcggaacctgatgtttggttcaatccaacaatggtctttgaa
gtgttgactgcagatttatctttgtcccctatttataaagcagggtccacagtttatggc
aaggggatttctctaagatttccacgttttataagaattagaactgataaatcagtaaac
gatgcgacttcttccgaacaagttattgatttctatgaaaatcaatctcacttgcaaagt
taa
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