Tenericutes bacterium MO-XQ: BK010_02170
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Entry
BK010_02170 CDS
T05457
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
tbm
Tenericutes bacterium MO-XQ
Pathway
tbm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BK010_02170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbm03400
]
BK010_02170
DNA repair and recombination proteins [BR:
tbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BK010_02170
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BK010_02170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
UB2H
AAA_7
AAA_22
AAA_30
RNA_helicase
Kinesin
AAA_19
DUF87
YqbF_HeH
Motif
Other DBs
NCBI-ProteinID:
AUD62444
UniProt:
A0A2K9AMS8
LinkDB
All DBs
Position
418584..420539
Genome browser
AA seq
651 aa
AA seq
DB search
MFDLKAPFVPKGDQIEAIETLSNNFHKGLNEQVLLGATGTGKTFTMANIINKLQKKTLIL
APNKTLAGQLYGELKAFFPHNKVEYFISYYDYYQPEAYVVSTDTYIEKDSSINDEIDEMR
HSATASLLNHDDVIVVASVSCIYGIGDPDTYKNSMIFMRIGENYGRDHLINKLVELTYQR
NDMDFHRGTFRVRGDSIEIIPVYERAQGIRVSFFGDEIEDIKRFDVLTGQALENLEYTSI
FPATHFMTDKDRLQESIRRIKNEMQEQVAYFKDNNLLLEAQRIEQRTRYDMEMLEEIGMC
SGVENYSRHLSLREAGETPATLIDFFGDDFLMIIDESHVTIPQVRGMYAGDRSRKETLVN
FGFRLPSALDNRPLQFQEFEKKLDKVIYLSATPGNYELERGLPIIEQIIRPTYLLDPEIE
VRKTEGQMDDLYFEIKKRAESNERVLVTTLTIRMSEDLTAYFKKLGLKVAYLHSEIKSLD
RIKILRELRMGKYDCLIGINLLREGLDLPEVSLVAILDADKQGFLRSERSLVQTVGRAAR
NVNGHVIMYADSISPAMQFAIDETNRRRSLQLEFNEKYQVEPVTIRKDIRDNISMKSDVI
EEEKDFTAMNKKDKEKTIKQLERDMQEAAKQLDFEKAAEIRDLIFELKAAD
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatttaaaagcaccgtttgttccaaaaggtgatcaaatagaagcaatcgaaaca
ttaagcaataactttcataaaggtttaaatgaacaagttttacttggagcaaccggcaca
ggtaaaaccttcaccatggccaatattattaataaactacaaaaaaagactttgatactc
gcaccaaataagaccttagcaggtcaactttatggcgagttaaaagccttttttcctcat
aataaggttgaatattttatctcatattatgattattatcaacctgaagcatatgttgta
tctacagatacatatatagaaaaagattcatcgatcaatgatgaaattgatgaaatgaga
catagtgcaactgcatctcttttaaatcatgatgatgtcatcgttgttgcatctgtttca
tgtatctatgggatcggagatcctgatacatacaaaaattctatgatctttatgagaata
ggtgagaactatggtagagatcatttaatcaacaaactcgtagaacttacatatcaaaga
aatgatatggattttcatcgtggcacatttagagttcgtggagattcaatcgaaatcatc
ccagtttacgaaagagcgcaaggcattagagtttctttttttggtgatgagattgaagat
attaagcgatttgatgtactcacaggccaagcattagaaaatcttgaatatacatctatt
ttccctgcaacacactttatgacagataaagatcgcttgcaagaatcgatccgtagaatc
aaaaatgagatgcaagaacaagtagcttattttaaagataacaatttacttcttgaagct
caacgtattgaacaacgtacaagatacgatatggaaatgttagaagaaatcggtatgtgc
tcaggtgttgaaaattactcaagacacctatctttaagagaagctggggaaacaccagca
acacttattgatttttttggggatgactttttaatgatcattgatgaatcccatgtgaca
atacctcaagtgagaggaatgtatgcaggagacagatcaagaaaagaaacgttagtgaat
ttcggttttagattgccatctgcacttgataatagacctttacaatttcaagagttcgaa
aagaaacttgataaagtgatttatttgagtgcaaccccaggtaattatgagcttgaaaga
ggacttcctattattgaacaaatcattagacctacttatttattagatccagaaattgaa
gtcagaaaaacagaaggtcaaatggatgatttatattttgagattaaaaagagagctgaa
agtaacgagcgtgttttagtcacaaccttaacgattagaatgagtgaagatttaacagct
tattttaaaaaacttggacttaaagttgcatatctacatagtgaaattaaatcacttgat
cgtattaaaatcttaagagaacttagaatgggtaaatacgattgcttaattggaattaac
ttacttagagaaggtctagatttaccagaagtctctttagttgcgatacttgatgctgat
aaacaaggattcttaagaagtgagagatctttagttcaaaccgttggacgtgcagcaaga
aatgtcaatggacatgtaattatgtatgctgattcgatctcaccagcgatgcagtttgcg
attgatgagaccaatcgtagaagatcattacaattagagtttaatgaaaaatatcaagtt
gaaccagtaacaattagaaaagatatcagagataatatctctatgaaatcagatgttatt
gaagaagaaaaagatttcactgcaatgaataaaaaagataaagagaaaacgattaaacaa
cttgaaagagatatgcaggaagctgcaaaacaacttgatttcgaaaaagcagctgaaatt
agggatttaatctttgagttaaaggcagctgattga
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