Thermoanaerobacter brockii: Thebr_2116
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Entry
Thebr_2116 CDS
T01409
Name
(GenBank) sigma-54 factor interaction domain-containing protein
KO
K19505
sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator
Organism
tbo
Thermoanaerobacter brockii
Brite
KEGG Orthology (KO) [BR:
tbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tbo03000
]
Thebr_2116
Transcription factors [BR:
tbo03000
]
Prokaryotic type
Helix-turn-helix
Other families
Thebr_2116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PRD
AAA_5
Sigma54_activ_2
EIIA-man
AAA
AAA_14
AAA_22
MarR
Mg_chelatase
HTH_20
HTH_Crp_2
RPA_C
AAA_16
TrmB
HTH_24
MarR_2
AAA_7
EAP30
ROK
HTH_40
Motif
Other DBs
NCBI-ProteinID:
ADV80623
UniProt:
E8URC7
LinkDB
All DBs
Position
complement(2124319..2127066)
Genome browser
AA seq
915 aa
AA seq
DB search
MTNKERVFNLIKDLSKDINIKEKKGLTAQEIAKKLNLRRNVASHLLNELYKEGKIIKINT
RPVYFLDKEVYEKKAKEFKETAKTLDSTVKVSNDDPFTKLIGYNGSLKTQVKLCKSAASY
PPNGLPILLIGNTGVGKSFIAQLIYEYAKSINAIDENAPYVIFNCAEYANNPELLSANLF
GYVKGAFTGADKDKPGLLEEADGGYLFLDEVHRLPPEGQEKLFLFLDKGIFRRLGETGNW
RTAKVRFIFATTEDPEQTLTKTFLRRIPLVVNIPSLYDRPLHERLQLIYNFYKNEAKNLG
MDILISKQVLNVLLKTKISGNIGQLMNVIKYSCAQAYNHVIREKTNILRIHLYDLPREMQ
ADLDIIKSNFHFNGMLISHNRKDEDLTWDKGDDREVYEVVNKLFELFERYSSKEISEDTF
KKDALIYLNEFTDKIIFKNDNTYIDSIVFNAIKSVVENVLNIIQNMYGIKYYGNSVLVLT
HFINYLLSDVTYEKYSENIKMVYRVLKNVFPKEFIIANKMVELIEVNLDVKLNQIAVIYF
TLYIKSLNKSDNTNLINSIIIAHGYSTASSIASVANRLLGQFVFEAFDMPIEMSTQEIML
KVQDYLKNIDTSKGIIILVDMGSLEEIYKSLTDIVEGDIAIINNITTQLALDVGNKIMQN
QPIEQIVTESIQRNSSSYKLIKSQKNKRNAIIATCITGIGTAVKIKELLKECFVNEDIEI
IAYDYNRLKGNGVKDEIFKDFNVKLIIGTADPGIKEIPYLSLEDLIAGKGDVLLSKVLRG
VADAEKIQRINQTIVRLFSLQNVLHHLTILNPDKIIAQVEKAISDLERFIGVRLSNDLKI
SLYIHVSVMIERLVMKEPIVFYSSLEEFEQCHRQFINFVKSSFSVIEEMYKIEIPTSEIR
LIYDIIKDRVAELNV
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaacaaagaaagagtatttaatttgataaaggatttgtcaaaagatataaatatt
aaagaaaagaagggattgactgcccaagaaattgcaaaaaaattgaatttaagaaggaat
gtggcaagccatttattaaatgaactttataaagagggcaaaataataaaaataaacaca
aggcctgtctattttttagacaaagaagtttatgaaaagaaggcaaaagaattcaaagaa
acggctaaaactttggattcaactgtaaaggtttcaaacgatgacccttttacaaagctt
ataggatataacggcagtcttaaaacacaagtgaaattatgcaaatctgctgcttcctat
cctcccaatggactacctattttacttattggaaatacaggagtaggtaaaagcttcatt
gctcaacttatttacgaatatgcaaaatcgatcaatgccatagatgaaaatgctccatat
gtgatatttaattgcgctgagtatgctaacaatcctgaactactttccgcaaaccttttt
ggctatgtaaaaggagcatttacaggtgctgataaagataaacccggccttttagaagaa
gcggatggaggatatttgtttttggatgaagttcacagattgccgccagaagggcaggaa
aaactgtttctatttttggacaagggaatatttagaaggcttggtgagacaggcaattgg
agaacggcgaaagtgaggtttatttttgctacaacagaagaccctgagcaaactcttaca
aagacttttttaagaagaatcccattagttgtaaatattccttccctttatgacagacct
ttacatgaaaggttacaacttatctataacttttacaaaaatgaggcaaaaaatctggga
atggatattttaataagcaagcaagtattgaatgttcttcttaagaccaaaatatccggc
aacattggccagcttatgaatgtcataaaatacagctgtgctcaagcctataaccatgtc
ataagagagaagacaaatatattgcgaatccatctatatgacctgccgagagaaatgcag
gctgatttagatataataaaaagtaattttcactttaacggcatgttaatttctcacaat
aggaaagatgaagatttaacatgggataaaggagacgatagagaggtttatgaggtagtg
aacaagctatttgaactatttgagagatatagcagcaaagaaataagtgaggatactttt
aaaaaagacgctttaatttatttgaatgaatttacagataaaataatttttaaaaatgac
aatacttatatagattcgatagttttcaatgctatcaaaagcgtagtggagaatgtgtta
aatataatacaaaatatgtatgggattaaatattatggtaattcagttttagtattgacg
cattttattaattatttattaagcgatgtaacttacgagaagtattctgagaatataaaa
atggtatacagagttttgaaaaatgtttttcccaaagagtttataatagctaataaaatg
gtagaacttattgaagttaacctggacgtcaagctcaaccaaatagctgtaatttatttt
acgctttatattaaaagtttaaataaaagtgacaatacaaatctcataaattctataata
atagcccatggttattcaactgccagtagcatagccagcgtcgccaataggcttttggga
cagtttgtttttgaagcttttgatatgccaattgagatgtcaacacaggaaattatgcta
aaagttcaagattatttaaagaatatagatacctccaaaggaatcattatattggttgat
atgggttctttagaggagatatacaagtctttgactgacattgtcgagggagacatagca
attattaataatattactactcaattggctttagacgttggcaacaagataatgcaaaat
cagcctatagaacaaattgttacagaatcaatccaaagaaatagcagtagttataaactc
attaagtcgcaaaaaaataaaagaaatgctattattgctacttgtataacgggaatagga
actgctgtaaaaataaaagaacttttaaaagaatgctttgtaaatgaagatattgaaata
attgcgtacgattataatagacttaaaggtaatggtgtaaaagacgagatatttaaagac
tttaatgttaaattaattattggtacagcagatcctggcataaaagaaataccttatttg
tcgttagaagatttgattgctggaaagggcgatgtactattgagtaaagttttaagaggg
gttgcggatgctgaaaaaattcagcgaatcaatcaaacgatagtcagacttttttctttg
caaaatgtgttacatcatttgacaatattaaatcctgataaaataattgctcaagttgaa
aaagctatttccgatttagaaagattcattggtgtgaggctttcaaatgatttaaaaata
agcttatatatacacgttagtgtaatgattgaaagattagtaatgaaagagcccattgtg
ttttacagtagtttagaagagtttgaacagtgtcatagacagttcataaatttcgttaaa
tcttcttttagtgtcatagaagagatgtacaaaattgaaattcctacatcagaaataagg
ctgatatatgatattataaaagatagagtagcagagttaaatgtgtaa
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