Thiocapsa bogorovii: LT988_17760
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Entry
LT988_17760 CDS
T07840
Name
(GenBank) ATP-dependent DNA ligase
Organism
tbog
Thiocapsa bogorovii
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
UHD15114
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Position
4001447..4003006
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AA seq
519 aa
AA seq
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MDTPATTLETLVRLSAEVAVRSSRRDKIGLIADLLGRLDREETALAASYLAGEIPQGRVG
VGPAQVEALRGLSPVAQGRLTLDDLDRTFDALLAVKGAGAQAKRRSLLHGLFQQATREEQ
GFLARLMLGELRQGAVEGLVMEAVALAAGLDPGLVRRALMLSGDPARVTRTAFDAGAAGL
RAIGLELFRPILPMLAQPAEDLDDALALLAAPDLEFKLDGARVQVHKRGEEVRVYSRQGH
EVTAAVPEILELIAPLPVADLVLDGEVLALRADGRPHPFQTSIRRFGRRLDVARLRAELP
LSAFFFDCIQCDGTLLIDAPARERFGALAEAVPDRALIPRLQRTDAAGARAFLNRALAAG
HEGIMAKDPAAPYAAGARGRQWLKIKPTHTLDLVVLAAEWGSGRRSRWLSNLHLGARDPA
GGFVMLGKTFKGLTDAMLTWQTERLNVLAVEREGSVVHVRPELVVEIAFNELQASPRYPG
GLALRFARVKRHRPDKTADQADDIATVQALFRRQIAYSS
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggatacccctgcgaccacgctcgaaacgctcgtccgactctcggccgaggtggcggtc
cgctcgtcgcgtcgcgacaagatcgggctgattgcggacctgctcggccggctggatcgg
gaggagaccgcgctcgcggcgagctatctcgccggcgagattccgcaaggccgcgtcggg
gtgggtccggcgcaggtggaagcgctccgcggtctgagcccggttgcgcagggccgtttg
accctcgacgatctggatcggacattcgatgcactgcttgccgtcaagggcgccggcgca
caggcaaagcggaggtcactgctgcacgggctgttccagcaggccacccgagaggagcag
ggatttcttgcccgactgatgctgggcgagctacgtcaaggggccgtcgagggcctggtg
atggaagcggtcgcgctagcggccgggctggatccgggactggttcggcgtgccctcatg
ctgagcggtgatccggcgcgtgtcacgcgcacggccttcgacgccggggcggcgggtctg
cgcgcgatcggtctggagctctttcgaccgatcctgccgatgctcgcccaacccgcggag
gatctcgacgacgcgctcgccctgctcgccgctcccgatctcgaattcaagctcgacggc
gctcgtgtccaggtccacaagcgtggcgaggaggtgcgggtctacagccggcagggccat
gaggtgaccgcggcggtgcccgagatcctcgagctgatcgcaccccttccggtcgccgat
ctggtgctcgacggcgaggtgttggcgctgcgtgcggacgggcgaccccatcccttccag
accagcatccgccgtttcggtcggcggctcgatgtcgcgcgtctgcgcgccgagcttccg
ctcagcgccttcttcttcgactgcatccagtgcgatgggacacttttgatcgatgcgccc
gcacgggagcgtttcggcgcgctcgccgaggcggtgccggatcgggcgctcattccacga
ctgcaacggaccgacgcggccggggcccgcgcctttctgaaccgggcactcgcggctggt
cacgaggggattatggccaaggacccggccgcgccctatgcggccggtgcgcgcggtcgg
caatggctcaagatcaagccgacgcacacgctcgatttggtggtcctggcggcggaatgg
ggcagcgggcggcgtagccgttggctgagcaatctgcatctgggcgcacgcgatcctgcg
ggcgggttcgtgatgctggggaagaccttcaagggcttgaccgatgcgatgctgacctgg
cagaccgagcgtctgaacgtgcttgcggtggaacgggaaggctcggtggtgcacgtgcgg
cccgagctggtcgtcgagatcgccttcaacgagcttcaggcgagtcctcggtatccgggt
gggctcgccttgcgcttcgcgcgcgtgaagcgccatcgtcccgacaagaccgcggatcag
gccgacgacatcgccacggttcaggcgctctttcggcgccaaatcgcctattcatcttaa
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