Thiocapsa bogorovii: LT988_18280
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Entry
LT988_18280 CDS
T07840
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog01501
beta-Lactam resistance
tbog01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LT988_18280
01503 Cationic antimicrobial peptide (CAMP) resistance
LT988_18280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tbog02000
]
LT988_18280
01504 Antimicrobial resistance genes [BR:
tbog01504
]
LT988_18280
Transporters [BR:
tbog02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LT988_18280
Antimicrobial resistance genes [BR:
tbog01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LT988_18280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
UHD15205
LinkDB
All DBs
Position
4124902..4128081
Genome browser
AA seq
1059 aa
AA seq
DB search
MISDVFIDRPRLSIVISVVITLAGLIAITRIPVAQFPDIVPPQVSVSAAYPGASASVVES
TVAQPIESQVNGVDNMLYMQSTSGNDGSYSLTVTFALGSDPDINTVNVQNRANLAMAQLP
EEVKRQGLTVQKKSNAMLQVVALSSPKGSYDGLFLSNYATINVVDTLARVPGVGQASLFG
PLDYSMRIWLDADRLTALSLTPADVIAAIQSQNIQAAVGRIGAQPMTADQQFQITLQTRG
RLTDAAEFERIVVRANPDGSNVLVSDVGRVELGARQSDSFSRLDGRDAAAIGIYLAPGAN
AVSVADGVEAAMDRLAERFPDDLAYTLVYDTTDFVNASLEKVVHTLLEAFVLVILVVFLF
LGSWRATLIPLIAVPVALIGTFAFLLAIGFSANTISLLAVVLAIGIVVDDAIVVVENVER
IMEEEGLAPREAAKKAMGQITGPIIAITLVLLSVFLPVAFIPGITGQLFQQFAAVVAFAM
LISAVNALTLSPALCAVLLKPGGHRRGPMRYVMSGIDRVRDGYAAIVARLVRVAMLVVVL
ILGIGLATGWLFKITPTGFLPEEDQGAFMAHVQLPQGASVSRTFEVVKELETLVEADPAV
AHVVTITGFSILDGAVLSNSAAVIGRLKPFEERTTADLKVDAVIDRIAAQTIGIPSARVM
PFNLPPIVGLGTGGGFQYQLEDLQGRTPEALAGVMRGLILAANQDPALSRVFSTWATDNP
QVFLNIDREKVQTLGVRISDVFNALQATLGGYYVNDFNRFGRVWQVQVAGREADRRSVED
IYRIHVRNDRGDMVPLRALLSPELILGPQLLQRYNNYRSVTIQGEPAPGFSSGDALTAME
RISAATLPAGYGFEWTGTAFQEREARGQTPIVLALAVLFAYLFLVGLYESWSMPAVVLLS
VTVGVLGALCGLWIAGLSNDLYAQVGIVVLIGLASKNAILIVEFAIEQRASGASILDAAT
RAARLRIRAVLMTSFAFILGLVPLIIASGAGEASQRGVGTAVFGGMLAASLIGIFLIPML
YVVFQRFREKVHGGVKVQDPVPGPGPGPGPGPEHEAPVS
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgatctccgatgtcttcatcgatcggccgcggctctcgatcgtcatctcggtcgtgatc
acgctggccggcctcatcgccatcacccgcatcccggttgcccagttccccgacatcgtc
ccgccgcaggtctcggtcagtgcggcctatccgggcgcgagcgcatcggtcgtggagtcg
acggtcgctcagccgatcgagtcgcaggtcaacggcgtggacaacatgctctacatgcag
tccaccagcggcaacgacggcagctactcgctgaccgtcaccttcgcgctcggctccgac
cccgacatcaatacggtcaacgtgcagaatcgggctaatctggcgatggcccagctcccg
gaagaggtgaagcgtcaggggttgacggtccagaagaaatccaacgccatgttgcaggtg
gtggcgctgagctcgccgaaggggtcctacgacgggctgttcctgagcaattacgcgacg
atcaacgtcgtcgacaccttggcgcgcgtgcccggtgtaggacaggcgtcgctgttcggg
ccgctcgactacagcatgcggatctggctcgacgcggaccgactgaccgcgctctcgctc
acgccggccgacgtgatcgcggcgatccagagccagaacatccaggccgcggtggggcgg
atcggcgcgcagccgatgacggccgaccaacagttccaaattacgctccagacccgcggg
cgcttgaccgatgcggccgagtttgagcgcatcgtcgtgcgggccaacccggacggctcg
aacgtgctggtttcggatgtcggacgcgtcgagctcggcgcgcgccagtcggactccttc
agccgattggacggacgggatgcggccgccatcggaatctatctcgcgccgggcgccaac
gcggtgtccgtcgccgacggtgtcgaggcagccatggatcggctcgccgagcggttcccg
gacgatctcgcctataccttggtgtacgacacgacggacttcgtaaacgcaagtctcgaa
aaggtcgtccataccctgctcgaggcattcgttctggtgatcttggtcgtgttcctcttt
ctcgggagctggcgcgccactctgatcccgttgattgcggtgcccgtggccttgatcggg
acctttgccttcctgctcgcgatcggtttttcggccaacaccatctctctgttggccgtc
gtgttggcgatcgggatcgtggtcgatgacgccatcgtggtggtggagaacgtcgagcgc
atcatggaggaggaggggcttgcgccgcgcgaggccgccaagaaggcgatgggccagatc
accgggcccatcatcgccatcaccttggtgctgctgtcggtcttcctgccggtggccttc
atccccgggatcaccggacagctctttcagcagttcgcggccgtcgtcgccttcgccatg
ctgatctcggccgtcaatgccctgaccctgtctccggcgctgtgcgcggtcctgctcaag
cccggcggtcatcgacgcgggccgatgcgctacgtgatgagcggtatcgatcgggtccgc
gacggctatgccgcgatcgtcgcgcggctggttcgtgttgcaatgctggtggtggtgctg
atcctggggatcgggcttgcgaccggctggctgttcaagatcacgccgaccggattcctc
ccggaagaggatcaaggggcctttatggcccatgtgcagttgcctcaaggtgcctcggtg
agccgcaccttcgaggtggtgaaggagctcgagacgctggtggaggcggatcccgcggtc
gcgcacgtggtcacgatcacgggcttcagcatcctcgacggggcggtgctctccaattcc
gcggccgtgatcgggcggctgaagcccttcgaggagcgcaccacggcggatctcaaggtc
gatgccgtcatcgatcggatcgcggcccaaacgatcggcatcccgagcgcccgggtcatg
cccttcaaccttccgccgatcgtcggtctcggaaccgggggaggttttcaataccagctc
gaagacctgcagggtcgcacccccgaggcgctcgccggggtgatgcgcggactgatcctc
gccgccaatcaggatcccgcactctcgcgcgtattctcgacctgggcgaccgataacccg
caggtgtttctcaacatcgatcgtgaaaaggtccagaccctgggtgtgcgcatcagcgac
gtcttcaacgcgctgcaggcgaccttgggcggctactatgtcaacgacttcaatcggttc
gggcgggtctggcaggttcaggtggcggggagagaggcggatcgccggagcgtcgaggac
atctaccggatccacgtgcgcaacgaccgaggcgacatggtgccgctgcgcgcactgctg
agccccgagctgatcctggggccgcagctcctgcagcggtacaacaactatcgcagcgtg
acgattcagggcgagccggcgcccggcttcagctcgggcgatgccctgacggcaatggag
cggatctccgcggcgaccttgccggcgggctacgggttcgagtggacgggcaccgccttt
caggaaagggaggctagggggcagaccccgatcgtgttggcgctggcggtcttgttcgcc
tatctcttcctggtcgggctctacgagagctggtcgatgccggcggtcgtgctcctgagc
gtgacggtaggggtactcggcgcactctgcggactctggattgcgggcctctcaaacgat
ctctatgcgcaggtcggcatcgtcgtgctcatcggactggcgagcaagaacgcgatcctc
atcgtcgaattcgccatcgagcagcgcgcgtccggggcctcgatcctggatgccgctaca
agggcggcgcgtctgcggatccgtgccgtcctcatgaccagctttgcctttatcctcggc
ctggtccccttgattatcgccagcggtgccggcgaggcgagtcagcgcggcgtcggcacc
gccgtcttcggcggtatgcttgccgcctcgctgatcggcatcttcctgatcccgatgctc
tacgtggtcttccaacggtttcgcgagaaggtccacgggggtgtcaaggttcaggatccg
gttccgggtccgggtccgggtccgggtccgggtccggagcacgaggctcctgtctcgtga
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