KEGG   Trypanosoma brucei brucei: Tb927.6.4780
Entry
Tb927.6.4780      CDS       T01013                                 
Name
(RefSeq) DNA ligase I, putative
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
tbr  Trypanosoma brucei brucei
Pathway
tbr03030  DNA replication
tbr03410  Base excision repair
tbr03420  Nucleotide excision repair
tbr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tbr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Tb927.6.4780
   03410 Base excision repair
    Tb927.6.4780
   03420 Nucleotide excision repair
    Tb927.6.4780
   03430 Mismatch repair
    Tb927.6.4780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tbr03032]
    Tb927.6.4780
   03400 DNA repair and recombination proteins [BR:tbr03400]
    Tb927.6.4780
Enzymes [BR:tbr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Tb927.6.4780
    6.5.1.6  DNA ligase (ATP or NAD+)
     Tb927.6.4780
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Tb927.6.4780
DNA replication proteins [BR:tbr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Tb927.6.4780
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Tb927.6.4780
DNA repair and recombination proteins [BR:tbr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Tb927.6.4780
   NER (nucleotide excision repair)
    Other NER factors
     Tb927.6.4780
   MMR (mismatch excision repair)
    Other MMR factors
     Tb927.6.4780
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 3658114
NCBI-ProteinID: XP_845595
UniProt: Q587E4
LinkDB
Position
6:1334045..1336144
AA seq 699 aa
MVSGPTATAVVQHKRIREDEDDIFDGERDDEMSAGCVNMAKIFLRTPPDPYGGCHASVWP
RPQENQKQGPDTVPYAAVADTLADISAESSRLECIRLLSNFLVAVIQRNPIDLVPVVYLV
INKQGPAHEGIELGVGDALLLKVVAECCGITEARAKEEYRQTGDLAEVAQSKKRIQSTLV
KPKRLTALAVFQALREIALMSGKDVARRRGDVIKRLLRDAVGPEVNLIVRALQQKMRVGL
AETSVLAAVGYAFAMSNIGVAKIPSLTPEQLQRELNVGAANLTRTYNEVPCLDVVLAAVL
QHGLEVIVPTSAEANMHARALSVRPGIPVKPQLAHPTSGVSVILDRFNGKAFTSEYKYDG
ERAQIHYTRSSGVQIFSRNSETNTSKYPDIISMLPEAFSVDTVDSFIIDAEVVAVDKVTG
ALQAFQVLQHRGRKNVSFDNVKVPVCVFAFDILYFNGEPQMSKTLSQRREVLHTHFKPVS
TKFRFAEYLDSNDVDDIQAFLDRAIRDGTEGLMVKTLEEESTYVPAKRSHYWLKLKKDYM
DGVTDTLDLVPIGAYYGKGKRTGVFGGFLLACYDGEGDEYQSICKIGTGFQDDQLEAITK
SLQPSILDEQPRYYRTEDKPDVWFQASQVWEVKAADLSISPAHFAAYGLVDASKGIALRF
PRFIRVREDKKVHEATSAAQVAEMYHNQSLAQRGVGDME
NT seq 2100 nt   +upstreamnt  +downstreamnt
atggtaagtggacctacagctactgcggttgtgcaacataagcggattcgtgaggatgaa
gatgacattttcgatggggagcgggatgatgaaatgtcagccggttgtgttaatatggca
aagatatttttacgtacaccaccggatccatacggcggctgtcatgcatcggtatggcct
cgacctcaagagaaccaaaagcaggggccggacactgttccttatgccgctgttgcggat
actcttgcggatattagcgcggagagttcaaggttggagtgcattcgactcctttcaaac
tttctcgtggctgtcatacaacgcaatccaatagatttggttcctgttgtttatctcgta
ataaacaagcaagggccagcccatgaggggatagaacttggtgtcggcgatgctctgcta
ctgaaagttgttgcggaatgttgtggcataacggaagcacgtgcgaaggaggaatataga
caaactggcgacttggccgaggtggcacagagcaaaaagcgcatacaatccacccttgtg
aaacccaagcgcttgactgcactagcagtgtttcaggcgttgcgtgaaattgccctcatg
agtgggaaagatgtggcacggcgccgtggtgacgtaataaagaggctccttcgtgatgcc
gtgggtcccgaggtcaacttgattgttcgagctttgcagcagaagatgcgtgtggggcta
gcggagacttctgttcttgcagctgtcggttacgcctttgctatgagcaacattggcgtt
gcaaaaataccatctcttaccccagaacagctgcaaagggaattaaacgttggtgcggct
aatctcactcgtacatacaatgaagttccctgtcttgacgttgttttggctgctgtgttg
cagcacggccttgaagtgattgttccgacgtctgcggaagcgaatatgcatgcgcgtgcc
ctctccgttcgccccggtattccagtgaaaccgcaacttgcccacccaaccagtggtgta
agtgttattttggatcgatttaatggcaaagcattcacctctgaatacaagtatgatggt
gagcgggctcaaattcactatacgaggagtagtggagttcagatcttttcacgcaactct
gaaacaaacacgagcaagtaccccgatattatatctatgcttcctgaagcgttttcggtt
gacaccgttgattctttcataattgatgctgaagtggtggcggtggacaaggtgactggt
gctttacaggcttttcaggtgctacaacatcggggacggaaaaacgtttcgtttgacaac
gttaaggttcccgtatgcgtgttcgcttttgacattttgtacttcaatggtgaaccacag
atgtcgaagacgctttcccagcgcagagaagtgctccacacccattttaaaccagtttcc
acgaagtttcggtttgccgagtacctggacagcaatgatgtggatgacattcaggccttc
ctggatcgcgccataagagatgggacggagggacttatggtgaagacgctcgaagaggag
tcgacgtatgtgccagcaaaacgttcgcactactggctgaaactcaaaaaagattatatg
gatggtgttaccgatacgcttgacctcgttcccattggtgcatactacgggaaagggaaa
cgcaccggtgtttttggtggatttcttctcgcatgctacgacggtgagggtgacgagtat
cagagtatatgcaagattggaactgggtttcaggacgatcagcttgaggccatcaccaaa
tcactccaaccatctatattggatgaacaaccgcgctactaccgcactgaagataagccg
gatgtgtggtttcaggcatcgcaagtgtgggaagtgaaggctgctgatctttctatatcc
cctgcccatttcgctgcatatgggttagtagatgcttcaaagggaattgcactgcggttt
ccgcggtttattcgcgtgcgtgaggacaagaaggtgcatgaggccacatcggctgcacag
gttgcagagatgtaccacaatcaatcgctcgctcaaaggggtgtgggcgatatggagtaa

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