Tribolium castaneum (red flour beetle): 103312683
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Entry
103312683 CDS
T01046
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03008
Ribosome biogenesis in eukaryotes
tca03013
Nucleocytoplasmic transport
tca03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103312683
03015 mRNA surveillance pathway
103312683
03008 Ribosome biogenesis in eukaryotes
103312683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tca03019
]
103312683
03009 Ribosome biogenesis [BR:
tca03009
]
103312683
Messenger RNA biogenesis [BR:
tca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103312683
mRNA cycle factors
Stress granule specific factors
103312683
Ribosome biogenesis [BR:
tca03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
103312683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAP_C
LRR_4
TpcC
LRR_9
Motif
Other DBs
NCBI-GeneID:
103312683
NCBI-ProteinID:
XP_008192192
UniProt:
D1ZZZ3
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All DBs
Position
LG4:5382631..5384797
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AA seq
542 aa
AA seq
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MASTLFFGSESQSITNLDAKKIRQSPHAIVVNDFSIQTGILYKNKEVLENPIYWHKFIVN
NAEDFSRDLVLKTILDHVQPMDLIPVFFLKEGSSASFLARNCGAAIEKICKDNLIIDNPY
VKNQPFKLTIILRFSTTNDVKIDVSKNISKVLRKRTNPATATINLENFYQDSDLTEFCIL
SQPKLMSYVLHLSRLAKPKAIILSNNEIRSLVPIEALWGINVTSLDLRNNLIMSLTELEP
LTQLKITELWLEGNPLCDNYDEHTYIQRVKEYCPKIERLDGVLLKHNGFPSFRRNFLCNS
CGHNLVDQFLDYYFTSYDSSNRGMLKNLYHKGALFSLTADYHSTQLSSASAQLKRYKTHS
RNLLSLADLSRSDLNLQQGSKAIIDLLNLLPPSEHDPYSFTVDLIHYSDVCAIVVVTGVF
KELPETILDAERFMGFNRCFALESINGEYCIINEQMHVFNALTSQQVKAFKHERPIRPQM
LPPAQTAKQKSQVITAMKLITNLTTEWAKKCLEECHYDFKSALALFVDLYKVDKIPADGF
QN
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaacgctgttttttggtagcgagtcccagtcgataacgaatttggacgcgaaa
aaaattcgccagagtccgcacgctattgtcgttaacgatttttcgatacagactgggatt
ctctacaaaaataaggaagttctggaaaaccccatctactggcataagtttattgtgaat
aacgccgaggattttagccgggacttggttttgaaaacaattctggaccatgtgcaaccg
atggatttaatcccggttttcttcctcaaagaaggcagttctgcttcgttccttgcgcgg
aactgtggagcagcgattgaaaaaatatgtaaagataatttgattattgataacccgtat
gtgaaaaaccaaccattcaagctcactattatattaaggttttccacaacaaacgacgtg
aaaatcgatgtttcaaaaaatatttccaaagtgttaagaaagagaacaaacccagccact
gcaaccataaaccttgagaatttctaccaagactctgatttaacagagttttgtattttg
tcccaacctaaactcatgtcttacgtgttacatttatcccgtctagcaaaacccaaagcc
ataatcttaagtaataacgaaatcagaagtttggttccgattgaggctctatggggaatc
aatgtgacaagtttagatttgagaaataatttgataatgagtttgaccgaactcgaacct
ttgacacaacttaagattactgagctttggttggaaggcaatcctctatgtgataattac
gatgagcacacttatattcaaagagttaaggagtattgtccaaaaattgaaagacttgac
ggtgttttattgaaacacaacggctttccgtcatttagaagaaactttttgtgtaacagc
tgtggccataatttagttgaccaatttctagattattacttcacttcctacgactcttca
aatcgaggcatgcttaaaaatttataccacaagggtgccctattttcgttaactgctgac
tatcactctacgcagttgtcttcagcttcagcccagttgaagcgttacaagacgcactcc
agaaatttactttctttagcagacttatctcggagcgatttgaatttacagcaaggaagt
aaagcgattatagatttgttaaatttattaccgccgtcagaacacgatccatattctttc
acggtcgatttaatacattattcggatgtttgtgccattgtcgttgtcactggagtcttt
aaagaactgccagagacaatcttggacgcggagcggtttatgggttttaacaggtgtttt
gcacttgaatccataaatggagagtattgcattattaatgaacaaatgcatgtcttcaat
gcgctcacttcgcagcaagtgaaggcattcaaacacgagaggcccatcaggccgcaaatg
ctcccacctgctcaaactgctaaacagaagagtcaggttattacagcaatgaaactcatt
acaaatttgaccaccgaatgggccaaaaagtgtttagaagaatgccactatgatttcaaa
agcgcacttgcgctctttgtagatctgtataaagtggataaaattcccgccgacggattt
caaaattaa
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