Tribolium castaneum (red flour beetle): 658738
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Entry
658738 CDS
T01046
Name
(RefSeq) putative ATP-dependent RNA helicase DHX30
KO
K13185
ATP-dependent RNA helicase DHX30 [EC:
5.6.2.6
]
Organism
tca
Tribolium castaneum (red flour beetle)
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tca03041
]
658738
03029 Mitochondrial biogenesis [BR:
tca03029
]
658738
Enzymes [BR:
tca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
658738
Spliceosome [BR:
tca03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
658738
Mitochondrial biogenesis [BR:
tca03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
658738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
OB_NTP_bind
HA2_C
HA2_N
AAA_22
AAA_19
NACHT
nSTAND3
B3R
AAA_11
dsrm
Viral_helicase1
ATPase
AAA_30
Motif
Other DBs
NCBI-GeneID:
658738
NCBI-ProteinID:
XP_008195117
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All DBs
Position
LG7:complement(1290133..1294170)
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AA seq
1075 aa
AA seq
DB search
MCSVFRKSHKKFEMWEKLSTLLTKNNLLQKRYLFSVQLGHCQHLQVTNSRILTPHTKKWL
SLLSNYRFSKFCQSSKLQVQPFNAISTSERLGNASLDRFLRDEKMDPEAYKKNLFKRRPV
SAVLKKSIKVRRPPDLVRHYSTSVDKEVDNKPATSDRISTSPKNVLHNVFAVVAQQLNNR
ELKLQPSYNIIKEKNKIVSWCCTYNPKWPEPMKFVSTGKTKQEASHKAAHAALLWLKKLE
KITPDGHPVMIDKREVLDINRRSLPTVTLDQNTTNHLKNVAEIYNNEFVPLLQENLDNKT
KPAFEINEIQSLSDVNGNLRQKVFPVSKYLAKEKVNLPISEYKEQFIHLLRENQIIIVKG
EPGCGKSTRIPQYVLESWATEGLSKGEPCRIAVTQPRRIAAMSLADRVSDERDERCGHIV
GYQIRLKSNFNPNTGRILYCTTGILLKHLQSDVNLSNFTHVILDEAHERDVNTDLLLNLL
RNAITKNNNLKLIVMSATVDIDLFKNYLNDAPTMHIPGFTYPVKSHFLDDINLDLGKTRK
ICENNESPNVMHEDVAKIIKHVHDTKDEGAILCFLPGWEDIVKVQKLIPMRGDLAVLCLH
SRLQDSDQRKIFSRTPPGVRKVILSTNIAETSVTIDDVVYVVDTGIHKENRFDNAKGVTC
IDNYWISQSSMTQRRGRAGRVRPGESFHLYTKSKYDSFSPFTDPEILKTSLTKIVLNSKV
YSNNMDALEFMSQLPSPPEKNTTRRAVRELKDLQLLDENENLTSLGRVLANFQLEPKLAK
VLVNAVVFKCVTPVVDIVTIFSSNTELFSTSLVDKDTIKQIKTKGSKHSDHLAMMRLFEA
WLQLMEERDASAAERYCYDAKLVHHKLVTLNKLRDIHFDYLHNGLHDSLPIADNFSDNDE
LVKAILFSGVGTLLRHRNFDIVKGRCKKSNVFLTSYNHKASITSESVNFKKTAFPSNFLV
YFNEIQSNIRRITLVRECSVIAPIAVLLFSDKPLVTKEVETNDKVLLSLKDTKIEIQCSK
EEAEHIIKCKEAIDSAYSYFIFQMTEGGECNSRINAIWDKILNHINSILEKHSIK
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgtgctccgtttttcgaaaatcgcacaaaaagtttgaaatgtgggaaaaactgtcaact
cttttaaccaaaaacaacctcctccaaaagcggtacttgtttagcgttcagctggggcac
tgtcaacacctgcaagtgaccaactcgcgaatcctaaccccacacaccaagaaatggttg
agtttgttatctaactaccgattttcaaaattttgccagtcaagtaagttacaagtccaa
ccgtttaacgcgatatcaaccagcgagagacttggcaatgcgtcacttgaccggttttta
agggacgaaaaaatggaccctgaagcttataaaaagaatttatttaaacgaagaccggtg
tctgcagtcttgaaaaaatcaattaaggtacgtcgacctccagatttagtgagacactat
tcaactagcgttgataaggaggttgataacaaaccggcaacttctgatagaatcagcact
tcgcctaaaaacgttctccacaatgttttcgccgttgttgcccaacaactcaacaacaga
gagcttaaattacaaccgagttacaacataatcaaggaaaaaaataaaattgtttcgtgg
tgttgcacctacaaccccaaatggcctgagccaatgaagtttgtctcaactggaaaaacc
aaacaagaggcttcgcacaaagcggctcatgccgctctactgtggttaaaaaaactggaa
aaaataacaccagacggccatccagtcatgatagataaacgcgaagtgttggacattaat
agacgctcacttcccacagtaacactcgaccagaacacaacaaatcacttgaaaaacgta
gcagaaatttacaacaatgagttcgtcccacttttgcaagaaaatctcgataataagacc
aaaccagcgtttgaaataaacgaaattcagagcttgagtgatgttaatgggaatttgaga
cagaaggtgtttccagtttccaaatatttagctaaggagaaagttaatttgcccatttct
gaatacaaggagcagtttatacatttgttgagagagaaccaaattattatagttaaaggg
gagccaggttgtgggaaaagtacccggattccgcaatatgttttggaatcgtgggccact
gaagggcttagtaagggagagccttgcagaattgcggtcacacaacctaggaggattgct
gccatgtctttggccgatcgggtgtctgatgaaagggacgaaaggtgcggtcacatagtc
ggttatcagatccgcctaaaatccaatttcaatccaaacaccggccgcatcctctactgc
acgaccggaattctcctcaaacatcttcaatccgacgtaaacttgagtaactttacgcac
gttattttagacgaagcccacgaacgggacgtgaacacagacctgttgctgaatttgcta
cgaaatgcaatcaccaaaaataataatttaaaactaatagtcatgagtgccaccgttgac
atcgacctgttcaaaaactacctcaacgacgctcccaccatgcacattcctggctttaca
tatccggtcaaatcgcatttcctcgatgatattaatctcgatttgggcaaaacgcgaaaa
atctgcgaaaacaacgaatcgccgaacgtaatgcatgaagatgtggccaagattattaaa
catgttcatgatacgaaggatgagggggcgattttgtgttttttgcccggttgggaggat
attgttaaagtgcagaagttgattccaatgaggggggatttggctgtgttgtgtctccac
tcaaggttgcaggattccgatcagaggaagattttttcgcggactccgcctggtgtcagg
aaagttattctctcgacgaatattgcagagacttcagtcacgattgacgatgttgtttat
gtggtcgatacggggattcacaaggagaatcggtttgataatgcgaaaggtgtcacgtgt
attgacaactattggatctcacagtcaagcatgacacagcgtagagggcgcgccggtcgt
gtacgaccaggcgaaagtttccacttgtacacaaagtcaaaatatgattcgttttcccca
ttcaccgatcccgaaattttgaaaacatccctcacaaaaatcgtcctaaactccaaagtt
tacagcaataacatggacgcgttagaatttatgagtcaattgcctagtcctcccgaaaaa
aatacaacacggagagccgtccgtgaattgaaagatttgcaactattggacgaaaacgaa
aatttaacatcactcgggagagtcttagccaattttcaattagaaccgaaattagccaaa
gtcttagtcaatgcagttgtgttcaaatgtgtgacgcccgttgttgatatcgttacgatt
ttttcgtcaaacaccgaattgtttagtacgagtcttgtggataaagataccattaaacaa
atcaagacgaaagggagcaaacatagcgatcatttagccatgatgcggctttttgaggcc
tggctacaactgatggaagagagggacgcatcagcagctgaacgatattgttacgatgct
aaattagttcaccataaacttgtcactctaaataaactgagggatattcatttcgattat
ttacacaacggcctccatgactcacttccaattgctgataacttctctgataatgatgaa
ctagtcaaagctattttattctcaggcgttgggacgttgctgaggcaccgaaactttgac
atagttaaagggcgctgtaaaaaatcgaacgtttttttgactagttataatcacaaagcg
tcgattacttcggaaagtgtcaattttaaaaagacggcgtttccgtcaaacttcttagtt
tattttaacgaaattcagtcaaatattaggagaattactttagttagggaatgcagtgtt
attgcccctatcgccgttctgttgttttctgataaacccctcgttaccaaagaagtcgaa
actaatgataaggttcttttaagtctcaaagacaccaaaatagaaattcaatgttccaaa
gaagaagccgaacacataataaagtgcaaggaagcgattgattcagcctactcctatttc
attttccagatgacggaaggtggcgagtgcaattcacgaataaacgcaatttgggacaaa
attctaaaccacattaactcaattttggagaaacacagtattaaataa
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