KEGG   Tribolium castaneum (red flour beetle): 658815
Entry
658815            CDS       T01046                                 
Name
(RefSeq) THO complex subunit 1
  KO
K12878  THO complex subunit 1
Organism
tca  Tribolium castaneum (red flour beetle)
Pathway
tca03013  Nucleocytoplasmic transport
tca03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tca00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    658815
  09122 Translation
   03013 Nucleocytoplasmic transport
    658815
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tca03019]
    658815
   03041 Spliceosome [BR:tca03041]
    658815
Messenger RNA biogenesis [BR:tca03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     658815
Spliceosome [BR:tca03041]
 Complex C
  Other components
   EJC/TREX
    658815
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    658815
SSDB
Motif
Pfam: efThoc1 Death
Other DBs
NCBI-GeneID: 658815
NCBI-ProteinID: XP_970265
UniProt: D6WX23
LinkDB
Position
LG8:10174777..10177058
AA seq 649 aa
MGGKFESLRVEYQDVLRKSFKTKTTDLIETKAKHLSKSAIDLKAPLDQAFRDVLLELLEK
EVNVSVLRELVDFSVLTCRKELSNPTMPVMLLSDIFDALTLDACQEMFLYVENNVEVWKE
NLFFSCCKNNLLRLCNDLLRRLSRSTATVFCGRILLFLAKFFPFSERSGLNIVSEFNLEN
TTEYGTDSSQEKGGDVDGDEKKNVIDFTFYCKFWSLQDFFRNPNQLYTKVQWKLFCTYAT
SVFNTFQGLKLEHVENNGSYCDESKNKMYFSKYLTSQKLLDLQLYDVNFRRAVLLQFLIL
FQYLSSSVKFKSESFELKSDQKEWIQSSTEKVYSLLRETPPDGKRFAEIASNILSREEYW
NAWKNDGCPELKKSVVPTESPDKRRTEERPLLGDIIKQASSEGKYYMGSTELTKLWNLCP
DNLEACKGRERDFLPTLEDYFADAIAQIESPGAVKDEDNLLKDGNYGWRALRLLAKRSPH
FFTYSTVIMNPLSSYLEMMVKKIAHDKPGRVTENSQESQQNDAEEENLFKDTQVDENTED
IKPSETEEFMDDKNARVEHKLNPNQLQLFSEKVAPNWKKLASKLGFKTDEIQFFSMENEK
EVDQARNMLQLWFDDDEDATLDNFLYILEGLEMEEAAEIVRNEINSMDS
NT seq 1950 nt   +upstreamnt  +downstreamnt
atggggggcaaattcgagtcgttacgggtcgaataccaggacgttttacgcaaatctttc
aagaccaaaaccaccgatttgatcgaaactaaagccaaacacttgtcgaagtccgccatc
gaccttaaggcccctctggaccaggcgttccgcgacgtcttactcgaactccttgaaaag
gaagtcaacgtctcagtcttacgcgagttggtcgattttagcgtcctaacatgtcgcaag
gaactgagcaaccccacaatgccagtgatgctcctttcggacatttttgacgccttaacg
ctggacgcctgtcaggaaatgttcctctacgtagagaacaatgtcgaagtgtggaaagag
aacttgtttttcagttgttgcaaaaataatttactcaggttgtgtaacgacttattgagg
cggttatctcggtccacggcgaccgttttttgcggccgaattctcctctttttggccaag
tttttcccgttttctgaacgttcaggtttgaatattgtgagcgaatttaatttggaaaac
acgacagagtatggcacggactcgagccaggaaaaggggggcgacgttgacggcgacgaa
aagaaaaacgtgatcgatttcacgttttattgcaagttttggtcgctccaggattttttc
cggaaccccaaccagttgtacactaaagtgcaatggaaactgttttgcacctacgccacg
agtgtctttaacacgttccaaggcctcaagcttgaacacgtggaaaataacgggagctat
tgtgacgaaagtaaaaataaaatgtacttttccaagtacctgacgagccaaaaattgctc
gacttgcaactgtacgacgtcaattttcggcgcgccgtcctgttgcagtttttaatttta
ttccagtacctttcatcatccgtaaaatttaaatccgaaagtttcgagttaaagtcggac
caaaaagagtggatccaatcaagcaccgaaaaagtctacagtttgttacgcgagactcct
ccagacggtaaacgatttgccgaaatcgcctcaaatattctaagtcgggaggagtattgg
aacgcttggaagaacgacggttgtcccgaactgaaaaaatcggtggttcccacggaaagc
cccgacaagcgccgaaccgaagagcgccctctcttaggcgacatcattaaacaggcctcc
agtgagggcaaatactacatgggaagcaccgaactgaccaaactgtggaacctatgcccc
gataacttggaggcttgtaaaggccgagagcgcgattttctccccacacttgaggattat
ttcgccgatgccatcgcccaaatcgagtcacctggcgcagtcaaagacgaagacaattta
ctgaaagatgggaattacgggtggcgggctttgagactcttggctaagcgcagcccccac
tttttcacctacagtactgtgattatgaaccccctgtcttcgtatttggagatgatggtc
aagaaaatagcgcatgataagccaggtcgcgtgaccgaaaattcgcaagagtcgcaacaa
aacgacgccgaggaagaaaatttgtttaaggacacgcaagttgatgaaaacaccgaagac
atcaaaccgtccgaaacggaggaatttatggacgataagaacgcgcgagtcgagcataaa
ttaaacccgaaccagttgcaactcttcagcgagaaagtggcccccaattggaaaaaacta
gccagcaagttgggcttcaaaactgacgaaatccagttcttcagtatggaaaatgagaaa
gaggtggaccaggcccgtaatatgctacaactgtggttcgatgacgacgaagatgccact
ttggacaacttcttgtacattttggaagggttggagatggaggaggcggcggaaattgtc
cgaaatgaaatcaattcgatggattcctaa

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