Tribolium castaneum (red flour beetle): 658815
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Entry
658815 CDS
T01046
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03013
Nucleocytoplasmic transport
tca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
658815
09122 Translation
03013 Nucleocytoplasmic transport
658815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tca03019
]
658815
03041 Spliceosome [BR:
tca03041
]
658815
Messenger RNA biogenesis [BR:
tca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
658815
Spliceosome [BR:
tca03041
]
Complex C
Other components
EJC/TREX
658815
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
658815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
658815
NCBI-ProteinID:
XP_970265
UniProt:
D6WX23
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All DBs
Position
LG8:10174777..10177058
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AA seq
649 aa
AA seq
DB search
MGGKFESLRVEYQDVLRKSFKTKTTDLIETKAKHLSKSAIDLKAPLDQAFRDVLLELLEK
EVNVSVLRELVDFSVLTCRKELSNPTMPVMLLSDIFDALTLDACQEMFLYVENNVEVWKE
NLFFSCCKNNLLRLCNDLLRRLSRSTATVFCGRILLFLAKFFPFSERSGLNIVSEFNLEN
TTEYGTDSSQEKGGDVDGDEKKNVIDFTFYCKFWSLQDFFRNPNQLYTKVQWKLFCTYAT
SVFNTFQGLKLEHVENNGSYCDESKNKMYFSKYLTSQKLLDLQLYDVNFRRAVLLQFLIL
FQYLSSSVKFKSESFELKSDQKEWIQSSTEKVYSLLRETPPDGKRFAEIASNILSREEYW
NAWKNDGCPELKKSVVPTESPDKRRTEERPLLGDIIKQASSEGKYYMGSTELTKLWNLCP
DNLEACKGRERDFLPTLEDYFADAIAQIESPGAVKDEDNLLKDGNYGWRALRLLAKRSPH
FFTYSTVIMNPLSSYLEMMVKKIAHDKPGRVTENSQESQQNDAEEENLFKDTQVDENTED
IKPSETEEFMDDKNARVEHKLNPNQLQLFSEKVAPNWKKLASKLGFKTDEIQFFSMENEK
EVDQARNMLQLWFDDDEDATLDNFLYILEGLEMEEAAEIVRNEINSMDS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggggggcaaattcgagtcgttacgggtcgaataccaggacgttttacgcaaatctttc
aagaccaaaaccaccgatttgatcgaaactaaagccaaacacttgtcgaagtccgccatc
gaccttaaggcccctctggaccaggcgttccgcgacgtcttactcgaactccttgaaaag
gaagtcaacgtctcagtcttacgcgagttggtcgattttagcgtcctaacatgtcgcaag
gaactgagcaaccccacaatgccagtgatgctcctttcggacatttttgacgccttaacg
ctggacgcctgtcaggaaatgttcctctacgtagagaacaatgtcgaagtgtggaaagag
aacttgtttttcagttgttgcaaaaataatttactcaggttgtgtaacgacttattgagg
cggttatctcggtccacggcgaccgttttttgcggccgaattctcctctttttggccaag
tttttcccgttttctgaacgttcaggtttgaatattgtgagcgaatttaatttggaaaac
acgacagagtatggcacggactcgagccaggaaaaggggggcgacgttgacggcgacgaa
aagaaaaacgtgatcgatttcacgttttattgcaagttttggtcgctccaggattttttc
cggaaccccaaccagttgtacactaaagtgcaatggaaactgttttgcacctacgccacg
agtgtctttaacacgttccaaggcctcaagcttgaacacgtggaaaataacgggagctat
tgtgacgaaagtaaaaataaaatgtacttttccaagtacctgacgagccaaaaattgctc
gacttgcaactgtacgacgtcaattttcggcgcgccgtcctgttgcagtttttaatttta
ttccagtacctttcatcatccgtaaaatttaaatccgaaagtttcgagttaaagtcggac
caaaaagagtggatccaatcaagcaccgaaaaagtctacagtttgttacgcgagactcct
ccagacggtaaacgatttgccgaaatcgcctcaaatattctaagtcgggaggagtattgg
aacgcttggaagaacgacggttgtcccgaactgaaaaaatcggtggttcccacggaaagc
cccgacaagcgccgaaccgaagagcgccctctcttaggcgacatcattaaacaggcctcc
agtgagggcaaatactacatgggaagcaccgaactgaccaaactgtggaacctatgcccc
gataacttggaggcttgtaaaggccgagagcgcgattttctccccacacttgaggattat
ttcgccgatgccatcgcccaaatcgagtcacctggcgcagtcaaagacgaagacaattta
ctgaaagatgggaattacgggtggcgggctttgagactcttggctaagcgcagcccccac
tttttcacctacagtactgtgattatgaaccccctgtcttcgtatttggagatgatggtc
aagaaaatagcgcatgataagccaggtcgcgtgaccgaaaattcgcaagagtcgcaacaa
aacgacgccgaggaagaaaatttgtttaaggacacgcaagttgatgaaaacaccgaagac
atcaaaccgtccgaaacggaggaatttatggacgataagaacgcgcgagtcgagcataaa
ttaaacccgaaccagttgcaactcttcagcgagaaagtggcccccaattggaaaaaacta
gccagcaagttgggcttcaaaactgacgaaatccagttcttcagtatggaaaatgagaaa
gaggtggaccaggcccgtaatatgctacaactgtggttcgatgacgacgaagatgccact
ttggacaacttcttgtacattttggaagggttggagatggaggaggcggcggaaattgtc
cgaaatgaaatcaattcgatggattcctaa
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