Tribolium castaneum (red flour beetle): 659751
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Entry
659751 CDS
T01046
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03022
Basal transcription factors
tca03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
659751
09124 Replication and repair
03420 Nucleotide excision repair
659751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tca03021
]
659751
03400 DNA repair and recombination proteins [BR:
tca03400
]
659751
Transcription machinery [BR:
tca03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
659751
DNA repair and recombination proteins [BR:
tca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
659751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
659751
NCBI-ProteinID:
XP_008200172
UniProt:
D6WU09
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All DBs
Position
LG7:3979275..3981369
Genome browser
AA seq
472 aa
AA seq
DB search
MADAEPAQPSSLFLKPTNLECKNLYDYLKTRSSATLEKLYNHPTICLAVYRELPELARQY
VIRILFVEQPVPQAVVASWGAQAFSKEHVYVSKVLSELSVWQEAAIPGGLLGWILSVTFK
KNLKIALLGGGKPWSMSSALEVDSKARDVSFLDAYSLERWECVLHYMVGSQQQEGISADA
VRILLHAGLMKRDEEDGSPVITRQGFQFLLLDRQAQVWHFLLQYLDTVEQRGLSLVECLT
FLFQLSFSTLGKDYSTEGMSPGLLIFLQHLREFGLVYQRKRKAGRFYPTRLALNITCSQG
PETRILEEDTPKGYIIVETNYRVYAYTDSNLQVALIGLFTELMYRFPNLVVGVITRDSIR
QALKGGITADQIIGYLKQHAHPQMLEGEAKHPLPPTVVDQIKLWEIERNRLTYSEGVLYS
QFLSQADFNILKEYAQSNGHLIWCNKEKRTLIINKSAHDDVKKFWKRYSKGN
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgccgagcccgcgcaacccagctcgctttttttgaaaccaacaaacttagaa
tgtaaaaacttgtacgactacttaaaaacgcgctcttcggcaacgttggaaaaactctac
aaccatccaacgatttgtttggccgtttaccgagaattgccagaactggcacgccagtac
gtgattcgaattttgttcgttgaacagccggtgccccaggcagttgtggcgtcatggggg
gctcaggccttttccaaagagcacgtttatgtgagtaaggttttgagcgaattgtcggta
tggcaggaggctgcgattccaggggggctcctaggttggatcctttcagttacgtttaaa
aagaatttgaaaattgccttattaggggggggcaaaccttggagcatgtcttcggcttta
gaagttgacagtaaggcaagagatgtgtcttttttggacgcttattcgctcgaacggtgg
gaatgtgtgttacattacatggtggggtcgcaacaacaagagggaatttctgcggatgct
gtcagaattttactacacgctgggcttatgaaaagagacgaggaagatggcagtcctgtt
ataacacgtcaaggcttccagtttttactcttagataggcaagcacaagtttggcatttt
ttactccaatatctcgacacagttgagcaaagaggattaagtctggttgaatgtttaacg
tttttattccaactctcatttagtacacttggaaaagattatagcactgaaggcatgagt
cccggccttttaatttttctccaacacttgagagaattcggattagtgtatcaaagaaaa
cgcaaagcaggccgtttttacccgaccagattggccttaaatattacgtgtagccaaggc
cccgaaactcgaattttggaggaagacactccaaaaggttacataattgtagagacaaac
tacagggtttatgcttacacggattctaatcttcaagttgctttaattggtcttttcaca
gaactgatgtataggtttccgaaccttgtagtgggcgtaataacacgtgattccataaga
caggctttgaaagggggaatcacagccgatcaaattatcgggtacctcaaacaacatgca
catcctcaaatgttggaaggtgaggccaaacatcctctacctccgacagttgtggatcaa
atcaaactgtgggaaattgagcggaacagattaacgtattcagagggcgttttatacagc
caattcctatcacaggctgattttaatatactgaaagagtatgcacagtctaatggccat
ctaatttggtgtaacaaagaaaaacggactctaatcatcaataaatcggcacatgatgat
gttaaaaagttctggaagcgatattcgaaaggaaattaa
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