Tribolium castaneum (red flour beetle): 661902
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Entry
661902 CDS
T01046
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
661902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tca03041
]
661902
Enzymes [BR:
tca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
661902
Spliceosome [BR:
tca03041
]
Complex A
U2 snRNP components
U2 related factors
661902
Complex B
661902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
661902
NCBI-ProteinID:
XP_008197421
UniProt:
D6WUR2
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All DBs
Position
LG8:complement(13957883..13969002)
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AA seq
1010 aa
AA seq
DB search
MVRGGRDRSRSPDRKRRRSRSRSKDRSRSSRHRRSRSRERRSRSRDRRERDRRSYSRDRD
RRRGDSKEKRSSGKSRRRDKSRSRSRSTDRKKDDSGLAFDPANLDKEEEQKKLELEMQKR
RERIERWRAERKKKEEEMKKDAPNATTTTDEATAKKWSLENDSEDEDKDKGETKEDQVEE
ETNGEAPPQEEKQEAKEEKKEEEEEEEEVDPLDEYMKGVQEEVRKTHKLDMKKPKTESGN
KKGALVIVTGVAKSKVNKNKGELIEQNQDGLEYSSEEEIEDLKDTAASIVNKQKKELAKI
DHNMVRYLPFRKNFYVEVPEIAKMTHEEVEAYKEELEGIRVKGKGCPKPIKTWAQCGVST
KELNILKKLGFEKPTPIQVQAIPAIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPPLE
ELDGPIAIIMTPTRELCMQIGKDIKKFTKSLNLHAVCVYGGTGISEQIAELKRGAEIIVC
TPGRMIDMLAANGGKVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSA
TFPRQMEALARRILQKPIEVQVGGRSVVCKDVEQHVVILEEDQKFLKLLELLGLYHEHGS
IIVFVDKQENADILLKELMKAAYNCLSLHGGIDQFDRDSTIIDFKSGKVKLLIATSVAAR
GLDVKHLILVVNYDCPNHYEDYVHRCGRTGRAGNKGFAYTFITPEQSRYAGDIIRAFELA
SVPIPDPLRALWDSYKSKQEAEGKKVHSGGGFSGKGFKFDENEAAAVTERKKFQKAALGL
ADSDDEDLEHDIDQHIESMFATKRTVKEIKAPLGLINPAAMNTQTAMDKLELAKRLASRI
NFSKNISLDTKFATQQAAESILKGSSSSLPITAKTVAEQLAAKLNTKLNYQPKDDDERDD
IDNEQTFRKYEEELEINDFPQQARWRVTSKEALAQISEYSEAGITVRGTYVPNGKNPPEG
ERKLYLAIESTSDIAVAKAKAEITRLIKEELLKLQTAGHHSFNKARYKVV
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggttcggggcggacgcgacaggagccgttctcccgaccggaagcggcgccgttcgcgc
tccaggagcaaagacaggtccaggtctagccgccaccgtcgaagtaggtcccgagagagg
cgcagcaggtccagagacaggagagagcgtgacaggcgttcgtacagtcgagaccgagac
cgtcgaagaggtgacagtaaggagaagcgcagttctggcaaatccagacgtcgggacaag
tccaggtctcgctccagatccacagaccggaagaaggatgattcaggtctggcttttgat
ccggcgaaccttgacaaggaagaagagcaaaaaaagttggaacttgagatgcaaaaacgc
cgcgaacgcattgagcgttggcgcgccgaacgcaagaagaaagaggaagaaatgaagaaa
gatgcaccaaatgcaaccacaacaactgacgaagccactgccaaaaaatggtccctagaa
aacgactccgaagacgaggataaagacaaaggcgaaacgaaggaggatcaagtcgaggaa
gaaacaaacggggaagcaccgccacaggaagaaaaacaagaagcgaaagaagagaaaaaa
gaagaagaagaagaagaagaggaagtcgatcctctagacgagtatatgaaaggagttcaa
gaagaagtgagaaagactcacaaacttgacatgaaaaagcccaaaaccgagtccgggaat
aaaaaaggtgccttagttattgtaacaggggtggccaaatccaaggttaataaaaacaaa
ggtgagttgattgagcagaatcaggacggtctggagtactcctctgaagaggaaattgag
gacttgaaagacacagctgcgagtattgttaataagcagaagaaggaattggcgaaaatt
gatcataacatggttagatatttaccgtttcggaagaatttctacgtagaagtgcccgaa
attgccaagatgacgcacgaagaggtggaggcctacaaggaggagttggaggggattcga
gtcaaaggcaagggctgccctaagcccatcaaaacatgggcccaatgcggcgtctcgacc
aaagagctcaacatcctcaaaaagctcggtttcgaaaaacccaccccaattcaagtccaa
gccattcctgcaataatgtccggtcgtgatttaatcggaatcgcgaaaaccggaagcgga
aaaacccttgctttcctcctccccatgttccgccacatccttgaccaacctccgctggag
gaactcgacggccctatcgccatcataatgacccccacacgcgaactgtgcatgcaaatc
ggcaaagacatcaaaaaattcaccaagagcttgaatttgcacgcggtttgcgtttacggc
ggcactggcatttcggaacagatagccgagttgaagcgcggggcggaaattatcgtatgt
accccgggacgcatgattgatatgttggcggcaaacggcggcaaagtcacgaatttgcga
cgcgttacttacattgtgcttgatgaagccgatcggatgtttgatatggggttcgagccg
caagtgatgcggattattgataatgtgagacctgaccgccaaacggtgatgttcagtgcg
acttttccgcgccaaatggaggcgctagccaggcggattttgcaaaagccgatcgaggtc
caggttggtggacgctcggttgtgtgcaaagatgtggaacaacacgttgttattctggag
gaggaccagaaattccttaaattattggagctgttgggtctctaccatgagcacgggagt
atcattgtctttgtcgataagcaggaaaacgccgatattttgttaaaagaattgatgaaa
gcggcgtacaattgcttgagtcttcacggtggtatcgaccaattcgatcgcgattcgacg
attattgattttaagtcggggaaagtcaaacttttgattgctacttcggtggcggctcga
gggctagatgtcaagcatttgatcctggtggttaattacgactgtcctaatcactatgaa
gattacgtccacaggtgtggtcggacaggacgtgcaggtaacaagggcttcgcctacacc
ttcatcacccccgaacagtcgcgatatgctggagatataatccgagcgtttgaactagct
tcagtccccatccctgaccccctgcgtgcactttgggactcctacaagtccaagcaagaa
gccgagggcaaaaaagtgcactccgggggtggtttcagtggcaaaggcttcaaattcgac
gagaatgaagctgccgcagtcaccgaacgaaagaaattccaaaaagcggccttaggtctt
gccgattccgacgatgaggatttggagcatgacatagaccaacatatcgagagtatgttt
gccacaaaacggacggttaaagagattaaagcaccgttaggattgattaatccagctgcc
atgaatacgcaaacggcaatggataagctagagttggcgaaaagattagcttcaaggatt
aatttttcgaagaatattagtctggatacgaagtttgccacgcagcaagctgctgaaagt
atactgaaggggagcagcagctcgttgccgattacggcgaagacggtggcggaacagttg
gccgccaaattgaataccaagctgaattatcagccgaaggacgatgatgagagggatgat
attgataatgaacagacgtttaggaagtatgaggaggagttggagattaatgattttccg
cagcaggcgaggtggagggtgacgtcaaaggaggccttagcccagatttccgaatattcc
gaggctgggattaccgtccgtggtacttacgttcccaacggtaaaaatccgccagaaggt
gaaagaaaactgtacctggccatcgaaagtacgtccgatatcgctgtggctaaagccaaa
gctgaaataacgcgcttgattaaggaggagttgcttaaactgcaaactgccggtcaccac
tcgttcaacaaagctagatacaaggtggtgtga
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