Tribolium castaneum (red flour beetle): 664578
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Entry
664578 CDS
T01046
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
tca
Tribolium castaneum (red flour beetle)
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tca03400
]
664578
DNA repair and recombination proteins [BR:
tca03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
664578
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_21
AAA_23
AAA_29
DUF3287
AAA_27
AAA
Motif
Other DBs
NCBI-GeneID:
664578
NCBI-ProteinID:
XP_975667
BEETLEBASE:
TC008773
UniProt:
D6WRS7
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Position
LG7:9730058..9734772
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AA seq
1043 aa
AA seq
DB search
MFKVGSIRKIEVKNFVTYSYAELYPGPNLNMLIGPNGTGKSTIVAAIILGLGGNPKTVGR
GVRVSEYVKHNCEEATIHIYLQGRKDNDFIKITRIFNTHDKTGWLVNNQRVTLKEVMDCI
KQYNIQVDNLCQFLPQDRVQDFAKMNQQQLLKETQVALCRTDLIEKQEALIACKNNHKQL
TEAIDKNGAKLQETRDANMRLEGKIENFSRKKKFLSQIEGIDRKIAWLQYDDLYEKMTET
KADLAKATKIYEKHKSATKPAEKEIQKAKQVVQELQQSNSNITRTIREHEASARNYVEKI
EQTKDKIRDIEQKMNDQIAIIEQKNQENEAMASKIEELKVAQRELLNQCGNDEEVQQKVR
KLTTEMQKFRRHVSELQNQRDEIVASRQTKSAQLRAYENEINRIDNVKQQRLNYLQRVDR
DAYEAVVWLRNNRNLFKGEIYEPIMLELNVLDSKNAMYVENVIPLRDRVAFTCTNKDDMN
ALIRLLRNEKQLTVNVLYAGDPNDHVSRYQPSIPIEQLRKYGLYAYMHSLFTAPEPIMRY
LCKTYRVHDIPIGNKQTNEFFQAVPSQIRVFFSDKVKYSVSYSRYTKAKSIRQNEIRSNG
GFSISVDVLQLERLRGQMQELRNSFDTCDTQMKELDTQISLINEKVSKLGEEHKYIHSIK
QQVQTIETRIVAMQRKVQELQQQSSNGDEIRAQGRNKIRKVIRVLPQLSQELKNTYESLT
VLTVKSELNFIKIEKARRHAAYLENKAVEARRLMEESEATLNQVKEAYANVKGQAKAALQ
KAKGLSKGYTPGDEAFEEFRETHERLSSDLRELQEEKLQLNAKIECLSTADDDEMREYEE
RVETIKNLQGSIERAHVDLSKISAKMDQLREEWLGPLGQLVTEINANFATAFERMGCAGE
VSINPGDDEQDFSNYGLRIKVTYRNGQPMQELNSVVQSGGERAVATAVFMLALQELTPVP
FRCVDEINQGMDVNNERRIFDLLVESTSQADTAQYFLITPKLVPNLSYSRSTMVHIVHNG
PFVEPDRKWGMSKLCNPQRALIH
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaagtgggcagtatacggaaaatcgaagtgaagaactttgtgacttacagctac
gcggagctgtacccgggccccaatttgaacatgctgattggccccaacggcacgggtaag
tctacaatcgtggctgctattattttgggacttgggggtaaccccaaaacagttggtaga
ggcgttagggtgtctgaatacgtgaaacacaactgtgaagaggccacaattcatatttac
ttgcaaggcagaaaagacaatgattttattaagattacacgaatttttaatacgcatgac
aaaacagggtggcttgtaaacaatcagagagtaacactgaaagaagtaatggattgcatc
aagcagtacaacatacaagtcgataatttgtgccagtttttgccccaagaccgggttcag
gatttcgcgaaaatgaaccaacaacaattattgaaggaaactcaagtagctctatgtcga
actgatttaatagaaaagcaggaggctttaatagcatgtaaaaataatcacaaacagctt
actgaagcaatcgataagaacggagcgaagttgcaggaaacccgcgacgctaatatgcga
ttagaaggcaagattgagaattttagtaggaagaagaaattcttaagccagattgaaggc
atagaccgtaaaatagcctggttacagtatgatgatctctacgagaaaatgaccgaaaca
aaagctgacttggctaaagcgaccaaaatttacgaaaaacacaagagcgctactaaacct
gcggaaaaagaaatccaaaaggccaaacaagtggttcaagaactgcaacaatcaaactca
aatattacacgcaccattcgcgagcatgaagcgtccgcccgaaattatgtggagaaaatt
gagcaaaccaaagacaaaataagggacattgagcagaaaatgaatgatcagattgccatc
attgagcaaaagaatcaagaaaacgaagccatggcttctaaaattgaagaattgaaagtc
gcgcaaagagaactactcaatcagtgtggcaacgacgaggaagttcaacaaaaagttcga
aaactaacgactgaaatgcagaaatttcgacgccacgtgagcgaattgcagaatcagaga
gatgaaatcgttgcgtcaaggcagacgaagtcggcgcaattacgggcttacgaaaacgaa
atcaacagaattgataatgtgaaacaacaaaggctaaattatttgcagcgcgtggacagg
gatgcctatgaagcggtggtttggctgaggaacaacagaaatcttttcaagggagagatt
tatgagcctataatgctagagctcaacgttcttgactcgaaaaatgcgatgtacgttgag
aatgtcattccgctgcgtgaccgcgtggcctttacttgcactaataaagacgatatgaat
gctttgattcgccttttgagaaatgagaagcaactgacagtcaacgtgctctatgctggt
gatcccaatgaccacgtatcacgttatcagccttctattcctatagagcagttgcgaaaa
tatggcttgtacgcttacatgcactcactatttaccgcccctgagccaataatgaggtac
ttatgtaagacgtaccgagtgcatgatattccaatcggcaataaacaaacaaacgagttc
ttccaagcagtgccttcccaaattagggttttctttagtgataaggtgaaatattcggtg
agctactcccgatacaccaaagctaaaagtataagacagaacgaaattagatcaaacggg
ggtttctccatatctgttgatgtgttacaattggagagacttcgtggccaaatgcaagag
cttagaaatagtttcgacacatgcgacactcaaatgaaagaacttgacacacagatttcg
cttattaatgagaaagtttcaaaacttggggaggaacacaaatatatccacagcatcaag
cagcaagtccaaacaattgaaactcgtattgttgccatgcagcgaaaggtgcaagagttg
caacaacagtcgtccaacggtgacgagattcgcgcccaagggcgcaacaaaattcgaaaa
gtcatccgagttcttccacaattgtcccaagaacttaaaaacacctacgagtccttaaca
gtcctcacagttaagagcgaattgaactttattaaaattgagaaagcgcgccgccatgcc
gcctatttggaaaacaaagctgtggaagcgcgacgcttgatggaggagagtgaagcgacc
ttaaaccaggtcaaggaggcttacgccaacgtgaagggtcaagccaaagcggcccttcag
aaggccaaaggcttgtccaaaggttatacacctggggatgaggctttcgaggagtttcgg
gagacccacgagcggctttcttccgacttgcgagagcttcaagaggagaagttgcaatta
aacgccaagattgagtgcttaagtacagccgatgatgacgagatgcgcgagtatgaagaa
cgggtggagacgatcaaaaacctacaagggagcatcgaacgggctcacgtcgatttgagc
aaaatctcggccaagatggaccaactgcgggaggagtggttgggtccgcttggccagttg
gtcactgagattaacgccaacttcgccacggctttcgaacggatgggctgtgcgggggaa
gtctccataaacccgggcgatgacgagcaagacttctccaattacgggctgcgtatcaaa
gtgacctatcgcaatggacagccgatgcaagaactcaacagtgtggttcaaagtggagga
gagagggctgtggcgacggcagtgtttatgttggcgttgcaagaattgactccagtgcct
tttcgatgcgtcgatgagattaatcaagggatggatgtgaataatgaacggaggattttc
gatttgttggtggagtcgaccagtcaggccgacacggcgcagtattttttgatcacgccg
aagctagtacccaacttgagctactcgaggtcgacgatggtgcatattgtgcacaacgga
ccgtttgtggagccggacaggaagtggggcatgtccaaattgtgtaacccgcaaagagcg
ctaatacattaa
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