Trinickia caryophylli: U0034_05030
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Entry
U0034_05030 CDS
T09722
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
tcar
Trinickia caryophylli
Pathway
tcar00521
Streptomycin biosynthesis
tcar00523
Polyketide sugar unit biosynthesis
tcar00541
O-Antigen nucleotide sugar biosynthesis
tcar01100
Metabolic pathways
tcar01110
Biosynthesis of secondary metabolites
tcar01250
Biosynthesis of nucleotide sugars
Module
tcar_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
U0034_05030 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
U0034_05030 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
U0034_05030 (rfbC)
Enzymes [BR:
tcar01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
U0034_05030 (rfbC)
BRITE hierarchy
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WQE12770
LinkDB
All DBs
Position
1:complement(1101754..1102305)
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AA seq
183 aa
AA seq
DB search
MAIQVTATALPEVKLIEPKVFGDTRGFFFESFNARDFAQHVDGEARFVQDNHSRSGKGVL
RGLHYQIEHAQGKLVRVVEGAVFDVAVDIRRASPNFGKWAGVMLSSDNHRQLWVPPGFAH
GFVVLSDAAQFLYKTTDYWYPEYERSILWNDAAIGIEWPIDFEPILAAKDAAGKCLAQAE
VYA
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggcaatccaagtaacggcgacggcgttgcccgaggtgaagctgatcgagccgaaggtc
ttcggcgacacgcgcggcttttttttcgagagcttcaatgcacgcgatttcgcgcagcat
gtcgatggcgaagctcgcttcgtacaggacaaccattcgcgttcgggcaaaggcgtgctg
cgcggcctgcattatcagatcgagcacgcgcagggcaagctcgtgcgcgtggtggaaggg
gccgtgttcgacgtggccgtcgacattcgccgagcctcaccgaacttcggcaagtgggcc
ggcgtgatgctctcgtccgataatcaccgccagctctgggttccgcccggattcgcgcac
ggcttcgtcgtgctttccgatgcggcgcagttcctctacaagaccaccgactactggtat
cccgaatacgaacgcagcattctctggaacgatgcggcgatcggcatcgagtggcccatc
gatttcgagcccatattggcggcgaaggacgcggcgggtaaatgcctggcgcaagccgag
gtgtacgcgtga
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