Trinickia caryophylli: U0034_22970
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Entry
U0034_22970 CDS
T09722
Name
(GenBank) ROK family transcriptional regulator
Organism
tcar
Trinickia caryophylli
Motif
Pfam:
ROK
MarR_2
HTH_24
MarR
HTH_20
Motif
Other DBs
NCBI-ProteinID:
WQE15395
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Position
2:852003..853211
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AA seq
402 aa
AA seq
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MNANPHPAATRPVGSNQVGMRQFNERIVLQAIRLHGPLPKAEVARLTRLSMQTASMIVDR
LIDDGLLMKLARVRGRIGQPSVPIALRPEGAYTIGVKVGRRSLDVLLMDFAGAVRSRDVL
DYAYPDPGVLFPALEQKLARVTATLGDQASKIVGVGVAAPLWLGGWRDFLGAPPTALEGW
NAIDIRARIAQMSGLPVEFAKDTTAACAAELVMGQGRGIHTFLYLFLGTFIGGGLVIDGR
LHGGPHGNAGAVGSIPLPASGGHAPRQLLHAASGFVLEQRMGAAGVPANAAHDHRAFAPE
LWPITRQWLDEACPAIASTIATSTALIDLEAVVIDGELDRQLVREIIRRTQRELDGVEWE
GMVRPQLLEGTIGSDARAMGGAILPLYAHFAPKHELFLKEDR
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgaacccgcatcccgccgcgacacgccccgtcggctcgaaccaggttggcatg
cgccaattcaacgagcggatcgtgcttcaggcgatccgcttgcacggcccgcttccgaaa
gccgaagtcgcgcggctgacgcggctaagcatgcaaacggcgtcgatgatcgtcgaccgg
ctcatcgacgacggcctgcttatgaaactcgcgcgtgtgcgcgggcggatcgggcagcca
tcggtgccgatcgcgctacggcccgaaggcgcctataccatcggcgtgaaagtcgggcgc
cgcagcctcgacgtgctcctcatggacttcgcgggtgccgtgcgcagccgtgacgtgctc
gactacgcctatccggacccaggcgtactttttcccgcgctcgagcaaaagctcgcgcgc
gtgaccgccacgctcggcgatcaagcatcgaagatcgtcggtgtgggcgtggccgcgccg
ctctggctcggcggatggcgcgattttctcggagccccgcccacggcactcgaaggctgg
aacgccatcgacatccgcgcgcggatcgcgcagatgtcgggcctgcccgtcgaattcgcg
aaggacacgacagcggcctgcgccgccgaactggtcatggggcaaggacgcggcatccac
acgttcctttatctgttcctcggcacgttcatcggcggcggactcgttatcgacggccgc
ttgcatggcgggccacacggcaatgccggcgcggtcggctcgattccgctgccggcaagc
ggcgggcatgcgccgcgacaactgctgcatgcggcatccggcttcgtgctcgagcagcgc
atgggtgccgcgggtgtgccagccaacgccgcgcacgatcatcgtgcgttcgcccccgaa
ctctggcccatcacgcggcagtggctcgacgaagcatgccccgccatcgcgagcaccatc
gccacctcgaccgccttgatcgatctcgaagccgtcgtcatcgacggcgaactcgatcgg
cagctcgtgcgcgagatcattcgccgcacgcaacgcgagctggacggcgtcgaatgggaa
ggcatggtgcggcctcaactgctcgaaggcacgatcggttcggatgctcgcgcgatgggc
ggcgctatcttgccgctatacgcgcatttcgcgccgaagcacgagctgttcttgaaagag
gaccgctga
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