Theobroma cacao (cacao): 18588301
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Entry
18588301 CDS
T02994
Name
(RefSeq) protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcc03021
]
18588301
Transcription machinery [BR:
tcc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
18588301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_19
TPR_8
TPR_14
TPR_16
TPR_17
TPR_11
TPR_6
TPR_9
TPR_7
ANAPC3
TPR_10
NatA_aux_su
DUF6584
Mpp10
Motif
Other DBs
NCBI-GeneID:
18588301
NCBI-ProteinID:
XP_017983098
LinkDB
All DBs
Position
9:complement(4082734..4092375)
Genome browser
AA seq
1094 aa
AA seq
DB search
MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIEQFR
QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA
SRIDMHEPSTWVGKGQLLLAKGEVEQAFAAFKIVLEGDRDNVPALLGQACVEFNRSRYSD
SLELYKRALQVFPNCPGAVRLGIGLCRYKLGQFEKARLAFQRVLQLDSENVEALVALAIM
DLQANEASGIQKGMDKMRRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH
GPTKSHSYYNLARSYHSKGDYEKAGFYYMASIKEINKPHEFVFPYYGLGQVKLKSGDFRS
ALSNFEKVLEVYPDNCETLKALGHIYVQLGQVEKAQEFMRKAIKIDPRDAQAFLDLGELL
ISSDTGAALDAFKTARSLMEKGGQAVPIEVLNNIGVLHFEREEFELALESLNKALGDGIW
LILTGNKPKSYVIEASASILDYKDMQLFHRLEEDGLPVELPWNKVTVVFNLARLHEQLHN
TGTANILYHLILFKYPDYVDAYLRLAAIAKARSNLQLSIELVNEALKVNDKCPNALSMLG
DLELKNDDWVKAKETFRSASDATDGKDSYAILSLGNWNYFAAIRNEKRAPKLEATHLEKA
KELYTRVLVQHTANLYAANGAGVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINL
AHVFFAQGNFALAVKMYQNCLRKFYYNTDSQILLYLARTHYEAEQWQECKKTLLRAIHLA
PSNYTLRFDAGVAMQKFSTSTLQKEKRTADEVRSTVAELENAVRIFSQLSAASNLHLHGF
DEKKINTHVEYCKHLLVAAKVHREAAEREEQQNRQKQEAARQLALAEEARRKAEEQRKYL
LERRKQEDEQKRLQQAEEHFKRVQEQWKSSTPASKRRERSEVDDEDGGHSEKRRKGGKRR
KKDKNKSRYERDDEEPYMMDDREELGDEDANMNYGESTTQMNDQDDDNGENAQDLLAAAG
LEDSDVEDEAAAAPSSAAGRRRRAWSESDDDEPLHRGTESSPVRENSAELQESDGEIRED
NSKLNGGGGLDEED
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcgtttatataccggttcagaactcagaagaggaagtgcgggtggctttggat
cagcttccacgagacgcttctgatattcttgatatcctcaaagctgaacaagctcctctt
gatctttggctcatcatcgcgagggagtactttaaacaagggaagattgaacaatttcga
caaattctcgaagaaggatccagtcctgaaatagacgaatattatgctgatgttagatac
gagaggattgctatcctaaatgctttaggggcttactacagctaccttggaaaaattgag
acaaaacaaagagaaaaagaggaacattttattctggctactcaatattacaataaagcg
tcaagaattgatatgcatgagccttcgacttgggttggcaaaggtcagcttctcctggca
aaaggtgaagtagaacaggcgtttgctgcgtttaaaattgttttggaaggagatcgtgat
aatgttcctgctcttcttggtcaggcatgtgttgagttcaaccgcagtcgttattctgat
tcattggagttatacaagagggccttgcaagtatttcctaattgtcctggggccgtcaga
ctcggtattggtctctgtcgatataaattgggtcaatttgaaaaagctagactggcattt
cagcgggttttacagttagactcagaaaatgttgaagctcttgttgcacttgcaattatg
gatttgcaagcaaatgaagcttctgggattcaaaaaggaatggacaaaatgcgtagggct
tttgagatatatccctattgtgcaatggcactaaactatctagcaaatcactttttcttc
actggccaacactttttagtggagcaactgactgaaacagctcttgctgtcaccaatcat
ggaccaacaaagtcacattcttattataatctagcacgctcttaccatagcaagggggat
tatgaaaaagctgggttctattacatggcatctatcaaggaaatcaataagccccatgaa
tttgtatttccgtactatggtttgggacaagtgaaactaaagtcaggagattttaggagt
gcactttcaaactttgaaaaagttttagaggtttaccctgataactgtgagacattgaag
gctcttgggcacatatatgttcagcttggtcaggttgaaaaggcccaagaatttatgaga
aaggccataaaaattgacccccgtgatgcacaggcatttcttgatcttggtgagttgtta
atttcatctgacacaggagctgctcttgatgccttcaaaacagcacgttctctaatggaa
aagggaggtcaagctgtgccaatagaagtgctcaacaatattggcgttctacattttgaa
agggaagagtttgagctagccttggaaagtctcaacaaggctctgggagatggtatatgg
cttatattaactgggaataagccaaaatcctatgttattgaagccagtgcatctatcctt
gactacaaggatatgcagttatttcatcgactggaagaagatggtcttcctgtagaacta
ccctggaataaagtaacagttgtatttaacctggccagattacatgagcagttacataac
actggaactgcaaacatattgtatcacctgatattgttcaagtatccagactacgttgat
gcttatctgaggcttgctgccatagcaaaagctcgaagtaatcttcaattaagcattgaa
ctggttaatgaggcactgaaggtgaatgacaaatgccccaatgcgttatctatgcttggt
gacttggagcttaagaatgatgactgggttaaggcaaaggaaacatttcgttccgcaagt
gatgcaactgatgggaaagattcctatgctattctttctctggggaactggaactacttt
gcagcaattcgcaatgagaaaagagctcctaagttggaagctacccatttggaaaaagcc
aaggaactctatacaagagtccttgttcagcatacagctaatttatatgctgctaatggt
gctggagtggttttggctgaaaaaggtcactttgatgtttcaaaagatatttttactcag
gttcaagaagctgcaagtgggagtgtttttgtccaaatgccagatgtgtggataaatttg
gctcatgttttctttgctcaaggaaattttgctttggctgtaaaaatgtatcaaaattgc
ttgcggaagttctattacaatacagactctcaaattcttctctaccttgctcggactcat
tatgaagctgaacaatggcaagagtgcaagaaaactctgttgagagccatccacttagct
ccgtcaaattacacactaaggtttgatgcaggagtagcaatgcagaagttctcgacatca
acattacagaaggaaaagcgaactgcagatgaggtacgttcaacagttgcagagctagag
aatgctgttcgtatatttagtcaattgtctgctgcatccaaccttcatcttcatggattt
gatgagaagaagattaacacccatgttgagtactgcaaacacttgcttgtagcagcaaaa
gttcaccgagaagcagctgagcgtgaagagcagcagaacaggcagaaacaagaagcagct
cgtcaacttgcattggctgaggaagcccgccgtaaggctgaagagcaaagaaaatacctg
ttggagagaagaaaacaagaagatgagcagaaaagactccagcaggcagaggaacatttt
aagcgtgtacaggagcaatggaagagtagcacccctgcatccaagcgaagggaaaggtct
gaagttgatgatgaagatggtgggcatagtgagaagagaagaaaaggtggaaagaggaga
aagaaggacaagaataaatcacgttatgagagggatgatgaggaaccttacatgatggat
gatcgggaagaattgggagatgaagatgccaacatgaattatggggaatccacaacacag
atgaatgatcaggatgatgacaatggagaaaatgctcaggatcttcttgctgctgctgga
ttagaagattctgatgtggaggatgaggcggctgccgcaccttcatcagctgcaggacgc
aggaggcgggcatggtcagaatctgatgatgatgaacctttacatagggggacagagtcg
agtcctgtcagagagaactcggctgagctacaggagagtgatggagagattagggaggat
aacagtaagctaaatggaggtggtgggcttgatgaggaggattga
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integrated database retrieval system
