Theobroma cacao (cacao): 18598024
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Entry
18598024 CDS
T02994
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
18598024
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcc02000
]
18598024
04147 Exosome [BR:
tcc04147
]
18598024
04090 CD molecules [BR:
tcc04090
]
18598024
Enzymes [BR:
tcc01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
18598024
Transporters [BR:
tcc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
18598024
Exosome [BR:
tcc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
18598024
CD molecules [BR:
tcc04090
]
Proteins
18598024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
Zeta_toxin
AAA_29
RsgA_GTPase
AAA_15
nSTAND1
AAA_5
SbcC_Walker_B
DUF87
Rad17
AAA_25
Motif
Other DBs
NCBI-GeneID:
18598024
NCBI-ProteinID:
XP_017977251
LinkDB
All DBs
Position
5:complement(3298450..3305280)
Genome browser
AA seq
1373 aa
AA seq
DB search
MSQDSEEIKTIEQWKWSEMQGLELVSAPPSDPFKTNPSTPTPTTTTNNTHLREQQEKPQQ
QSQAEAQAYQESVGERREMETSSSSSETKKDGSNNGSSGSGEKPGDLPSVGFGELFRFAD
GLDYVLMGIGSLGAFVHGCSLPLFLRFFADLVNSFGSNANNMDKMMQEVLKYAFYFLVVG
AAIWASSWAEISCWMWTGERQTTKMRIKYLEAALNQDIQYFDTEVRTSDVVFAINTDAVM
VQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPLIAVIGAIHTTTLAKLSA
KSQAALSHGGNIVEQTVVQIRVVMAFVGESRTLQAYSSALKVAQKIGYKSGFAKGMGLGA
TYFVVFCCYALLLWYGGYLVRHHYTNGGLAIATMFAVMIGGLGLGQSAPSMSAFAKAKVA
AAKIFRIIDHKPGIDRNSESGLELESVNGLVELKNVDFAYPSRPDVKILNNFSLSVPAGK
TIALVGSSGSGKSTVVSLIERFYDPISGEVLLDGHDIKTLKLRWLRQQIGLVSQEPALFA
TTIKENILLGRPDANQIEIEEAARVANAHSFIVKLPEGFDTQVGERGLQLSGGQKQRIAI
ARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVL
QQGSVSEIGTHDELISKGENGVYAKLIRMQEMAHETALNNARKSSARPSSARNSVSSPII
ARNSSYGRSPYSRRLSDFSTSDFSLSLEASHPNYRMEKLAFKEQASSFWRLAKMNSPEWV
YALVGSIGSVVCGSLSAFFAYVLSAVLSVYYNPDHAYMSREIGKYCYLLIGLSSAALLFN
TLQHFFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIG
DRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMKGFSGDLEAAH
AKATQLAGEAIANVRTVAAFNSENKIVGLFSSNLQTPLRRCFWKGQIAGSGFGVAQFSLY
ASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFD
LLDRKTEIEPDDPDATQVPDRLRGEVELKHVDFSYPSRPDVPIFRDLNLRARAGKTLALV
GPSGCGKSSVIALIQRFYEPSSGRVMVDGKDIRKYNLKSLRKHIAIVPQEPCLFGSTIYE
NIAYGHESATEAEIIEAATLSNAHKFISSLPDGYKTFVGERGVQLSGGQKQRIAIARALV
RKAELMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIEDGKV
AEQGSHSHLLKNYPDGCYARMIQLQRFTHSQVVGMTSGSSSSARPKDDNEREA
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagattctgaggagataaagacgattgagcagtggaaatggtccgaaatgcaa
ggccttgaacttgtgtctgctcctccttctgacccttttaaaaccaacccatcaacccca
actccaacaacaacaacaaataacacacacctaagagaacaacaagagaaacctcaacag
caaagtcaagctgaagctcaagcttatcaggagagtgtaggggagagaagggaaatggaa
acttcttcttcttcatctgagacaaaaaaagatgggagtaataatggtagtagtggaagt
ggagagaagccaggggatctcccatcagttgggtttggtgaactatttagatttgctgat
ggtttggattatgtgttgatgggaattggctctctcggtgcttttgtacatggctgttct
ttgcctctcttccttcgtttctttgccgatcttgtcaattcttttggttctaatgctaat
aacatggacaagatgatgcaagaagttctaaagtatgcattttacttccttgtggtgggt
gctgcaatttgggcttcttcatgggcagaaatatcctgttggatgtggactggagagagg
caaacaacaaagatgaggatcaagtacttagaagcagctttgaaccaggacattcaatac
tttgacactgaggttagaacttctgatgttgtgtttgccatcaacactgatgcagtgatg
gtccaggatgccattagcgagaagttgggtaatttcattcactacatggcaacatttgta
tctggttttgtggttggtttcacagcagtttggcaattggctttggtcacacttgcagtg
gttcctctcattgctgtgattggagcaatccataccaccacattagccaagctttctgca
aagagccaagcagctttatcacacggaggaaatattgtggaacagacagtagttcaaatt
cgggttgttatggcatttgttggtgaatcaagaacattacaagcctactcctcagcattg
aaggttgcacaaaagattggttacaagtctggatttgcaaagggaatgggattgggagca
acttactttgttgttttttgttgttatgctcttcttctttggtatggaggttatctggtt
aggcatcattacactaacggaggacttgccatagccactatgtttgcggttatgattggt
ggattgggtttgggacagtctgcaccaagcatgtctgcatttgcaaaggccaaagtggca
gcagcaaaaattttccgtataattgatcacaaacccggtattgatagaaacagtgagtca
ggtttggagttggagtcagttaatggtctagttgaactgaaaaatgtggactttgcatac
ccatcaaggccagatgtaaagatccttaacaatttctccctaagtgttcctgccggaaag
accatagctttggtaggaagcagtggttctggtaaaagcactgtggtctccctcattgag
agattctacgatcccatctcaggagaagtgctgctagatgggcatgacataaagacatta
aaactgagatggttgaggcaacaaataggacttgtgagccaagaacctgctcttttcgct
accaccattaaagaaaacatacttttaggtaggcctgatgcaaaccaaattgagattgaa
gaagctgccagagttgctaatgcccattcattcattgtaaagcttcctgaaggctttgac
actcaggttggagagagaggacttcaactctccggtgggcagaagcagagaattgctata
gccagggcaatgttgaagaacccagcaatcctactcttggatgaagcaactagtgcactt
gactctgagtcagaaaagctggtgcaagaggcccttgatcgttttatgattggtaggaca
actcttgtcattgcccatcgcctttccaccattcgcaaggctgatgttgtagctgtactc
cagcaggggagtgtttctgaaattggaacacatgatgagctcatttccaaaggagaaaat
ggggtctatgccaagctcatccgaatgcaagagatggcacatgaaactgcccttaacaat
gctagaaaaagtagtgcaaggccttctagtgccaggaactcagtaagctcgccgattatt
gcccgcaattcgtcttatggccgatcaccatattctcgcaggctttctgacttctctaca
tctgatttcagtctttcccttgaggcctcacatcctaattatcgaatggaaaagcttgcc
ttcaaggagcaagctagttccttctggcgccttgcaaaaatgaattctcctgaatgggtt
tatgctttagttggttctatagggtctgttgtctgtgggtccctaagcgctttctttgca
tatgtgctaagtgctgttctcagtgtctactacaacccagatcatgcttatatgagcaga
gaaattgggaaatattgctatttgttaattggactttcatcagctgcccttctcttcaac
acactacagcatttcttttgggatattgtgggagaaaatctcacaaaacgagtgagagag
aagatgctggcagcagtgctgaaaaatgaaatagcatggtttgatcaggaggaaaatgag
agtgctaggattgcagcaaggctggctcttgatgccaacaatgtcagatcagccattgga
gaccggatttcagtgattgtgcagaacacagcactcatgcttgttgcctgcactgctggc
tttgtgttgcagtggcgccttgcccttgtccttgttgcagtcttccctgtggtcgtggca
gcaactgttttgcagaaaatgtttatgaaaggtttctcaggggatttagaagctgctcac
gccaaggccacgcaactagctggagaggccatagccaatgtaagaactgttgctgccttc
aattcagaaaacaaaattgttggccttttctcctcaaaccttcaaactccattaaggcgc
tgcttctggaagggacaaattgcaggaagtgggtttggggtagctcagttttcactatat
gcttcttatgcccttggtctttggtatgcttcctggcttgtgaagcatgggatctctgat
ttttcaaagacaatccgagtctttatggttctcatggtctctgccaatggtgcagctgaa
acattaaccttagctcctgacttcatcaagggaggtcgagctatgcgatcagtctttgat
cttcttgaccgtaaaactgaaattgagcctgatgacccagatgccacacaagttccagac
cgccttcgtggagaagttgaattaaagcatgtagacttttcttacccctcacgtcctgac
gtccctattttccgggaccttaatcttcgtgcccgagctggaaaaactcttgcccttgtt
ggtccgagtggatgtggtaagagctcggtcattgcacttatacagagattctatgagccc
tcatctggacgtgttatggttgatggaaaagacattcggaagtacaacctcaaatccctg
agaaaacacattgcaatagttccacaggagccttgcctctttggttctaccatctatgaa
aacattgcctatgggcatgagtcagcaactgaggctgagatcattgaggcagctactcta
tccaatgcccacaagttcatatcttcattgcccgatggttacaaaacttttgttggggag
agaggagtccaactttctgggggccagaaacagagaattgcgattgcaagggctcttgtg
aggaaggcagagcttatgctgcttgatgaggcaacaagtgcccttgatgctgagtctgag
agatcagtccaggaggccctggaccgagcctgctcaggaaaaaccacaattgtggttgct
catcggttatcaacaattaggaatgcacatgtcattgcagtgattgaagatgggaaagtt
gcagagcaaggaagccattcacatttgctgaaaaattatcccgatgggtgttatgcccgc
atgatacaattacaaaggtttacacatagccaagtcgttggaatgacatcaggctcaagt
tcttcagcaagaccaaaagatgacaatgaaagagaagcctag
DBGET
integrated database retrieval system
