Theobroma cacao (cacao): 18605041
Help
Entry
18605041 CDS
T02994
Name
(RefSeq) elongator complex protein 3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcc03016
]
18605041
Enzymes [BR:
tcc01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
18605041
Transfer RNA biogenesis [BR:
tcc03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
18605041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM_C
Radical_SAM
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
FR47
Motif
Other DBs
NCBI-GeneID:
18605041
NCBI-ProteinID:
XP_007037876
LinkDB
All DBs
Position
3:complement(25469262..25473012)
Genome browser
AA seq
564 aa
AA seq
DB search
MATAVMAPEPKKLPRPGRGGFQAHGLTEEEARVRAIAEIVSTMVELSRKNQTVDLNAIKS
AACRKYGLTRSPKLVEMIAALPESDRESLLPKLRAKPVRTASGIAVVAVMSKPHRCPHIA
TTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVD
KVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVTYSEHSAVKCIGMTIETR
PDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVA
HMMPDLPNVGVERDLESFKEFFESPLFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPE
QLVDIVARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRT
REAGIQDIHHKIKPEEVELVRRDYTANEGWETFLSYEDTHQDILVGLLRLRKCGRNTTCP
ELMGKCSIVRELHVYGTAVPVHGRDADKLQHQGYGTLLMEEAERIARREHRSTKIAVISG
VGTRHYYRKLGYELEGPYMVKYLV
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgccgtcatggctccggagccaaaaaagctcccgcgtcccggccggggcggg
ttccaagcccacggactaacagaagaagaggcccgagttcgagccatcgccgaaattgtc
agcaccatggtggaactctcacggaagaaccaaacagtggacctgaatgccatcaaatcc
gccgcgtgccgaaagtacggactcacacgctccccgaagctggtggagatgatcgcggca
cttcccgaatcggaccgggagtcccttcttcctaagctccgagccaaaccggtccgaacc
gcgtccggaatcgcagtcgttgctgttatgtcgaagccgcatcgttgcccgcatattgcg
actacgggaaatatttgtgtttattgccccggtggaccggactcggattttgagtacagt
acgcagtcgtatactggatatgagccaactagcatgcgagcaattcgagccaggtataac
ccatatgtccaggcaagaagcaggatagatcagctgaagcgattgggtcacagtgtagat
aaggttgagttcatcttgatgggtggtactttcatgtcactgccagcagattaccgagac
tattttattaggaatcttcatgatgctttatcaggacacacttctgccaatgttgaagag
gcagttacctactctgagcatagtgccgtaaagtgcattggaatgacaattgaaacgagg
ccagactattgcctaggccctcatttgcgccaaatgctttcttatggttgtacacgactg
gagattggagttcaaagcacatatgaggatgtagcccgtgacactaatagaggacacaca
gttgctgcagtggctgattgtttttgcttggcaaaggatgctggtttcaaggttgttgct
catatgatgcctgatcttcctaatgttggtgtcgagagagacttggaaagttttaaagag
ttttttgagagccctttatttcgagctgatgggcttaaaatttatcccacccttgtaatt
cgcggaactgggctctatgagctttggaaaactggcaggtatagaaattacccacctgag
cagcttgtggacattgtggcaaggatcttggccatggtacctccgtggacacgtgtttat
agggttcagcgggatatccctatgcctctggttacttcaggggttgagaaaggaaatctt
cgtgaactagctttagctcgtatggatgacttgggcttgaagtgtcgggatgttcgaaca
cgtgaagctggaatccaggacattcaccacaaaattaaacctgaagaagttgagcttgtt
cgacgtgattatacagcaaatgaaggttgggaaacatttctgtcatatgaagatacacac
caggatattcttgttgggttgttgcgtctgcgaaagtgtggccggaacactacttgccct
gaactaatggggaaatgttctattgtccgtgaacttcatgtgtatggaactgctgttcca
gttcatggccgggatgctgacaagctgcaacaccagggttatggtacacttttgatggaa
gaagcagagcgtattgctcgcagagagcatagatcaacaaaaatagctgttatctctggt
gtagggacccgccattactataggaaattgggctatgaacttgaagggccttacatggtg
aaatatcttgtttga
DBGET
integrated database retrieval system