Theobroma cacao (cacao): 18606115
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Entry
18606115 CDS
T02994
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcc04131
]
18606115
Membrane trafficking [BR:
tcc04131
]
Protein recycling
Others
EARP complex
18606115
Endosome - Golgi transport
Tethering complex
GARP complex
18606115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
RINT1_TIP1
COG4_N
MUN
COG7
Vps54_N
LXG
DUF401
Motif
Other DBs
NCBI-GeneID:
18606115
NCBI-ProteinID:
XP_007039607
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Position
3:complement(31755414..31765791)
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AA seq
824 aa
AA seq
DB search
MDKMSTLEYINQMFPTEASLSGVEPLMQKIQSEIRRVDAGILAAVRQQSNSGTKAKEDLA
AATHAVEELTYKIREIKTKAEQSEMMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSA
VEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDIPKITELREKFKNIKQILKSHVFSD
FSSLGTGKETEETNLLQHLSDACLVVNALEPSVREELVNNFCSRELTSYEQIFEGAELAK
LDKTERRYAWIKRRMRTNEEIWKIFPMSWLVPYRLCIQFCKKTRKQLEGILDNLKEKPDV
ATLLLALQRTLEFEDELAEKFGGGTQSREIGNDIEEIGRQNNSRSALDIRKKYEKKLAAH
QGSENEEKVGNKDLSAPGAGFNFHGIISSCFEPHLIVYIELEEKTLMENLEKLVQEETWD
VEEGSQNNVLSSSMQLFLIIKRSLKRCSALTKSQTLYNLFRVFQRVLKAYATKLFARLPK
GGTGIVAAATGMDGQIKTSDRDERVICYIVNSAEYCHKTSGELAESVSKIIDSQFADRVD
MSEVQDEFSAVITRSLVTLVHGLETKFDAEMAAMTRVPWGTLESVGDQSGYVNGINMILT
SSIPVLGRLLSPIYFQFFLDKLASSLGPRFYMNIFKCKQISETGAQQMLLDTQAVKTILL
EIPSLGQQTSGAAGYSKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRIL
ELKGLKKSDQQTILDDFNKGAPAISQPSSVAPVSQATPPAPPTTTVAAILNPASVGFIAS
REDVLTRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNA
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaatgagtactctggagtacatcaaccagatgttccccacagaggcttcttta
tctggtgttgagcctctaatgcaaaagatacaaagtgagattcgtagagtggatgccgga
atattggctgctgttcgccagcagagtaattcaggaaccaaagctaaggaggaccttgct
gctgctacacatgctgtggaggaactaacatataaaatccgtgaaataaaaacaaaagct
gagcaaagtgagatgatggttcaagaaatatgccgtgatatcaagaagctggactttgct
aagaagcatataacaactacaattacagctcttcatcgtttaaccatgctagtctctgcg
gttgagcaacttcaagtgatggcttcaaaacgacaatataaggaggcggctgcccagtta
gaggctgtaaaccagttatgcagtcattttgaagcctatagggatattccaaaaatcaca
gagctgagggagaagtttaagaatattaaacagatactgaaatcacatgtcttctctgat
ttctcaagcttaggaactggcaaggagaccgaagagactaatttgctgcagcacttatct
gatgcttgtttagtcgtcaatgcgttggaaccatctgtgagagaagagttggtaaataac
ttctgcagcagggagcttacttcatatgaacagatctttgaaggagctgaactagctaaa
ctggataaaacggaacgaaggtatgcatggatcaagcgacggatgagaacaaatgaggaa
atctggaaaatctttcctatgtcatggcttgtcccttatcgtctctgtatccagttctgt
aagaagacaaggaaacaactggaggggatccttgacaacctgaaagagaagcctgatgtt
gcaaccttgctgttggcactacaaagaactttagaatttgaggatgaattggcagagaaa
tttgggggtggtactcagagtagagagattggaaatgacattgaagaaattggcaggcag
aataatagtcgaagtgctttagatattcgaaagaagtatgagaaaaagcttgctgcacat
caaggaagtgagaatgaagaaaaggttggaaacaaagatttgtctgcacctggagctggg
ttcaacttccatgggattatttcatcctgctttgagcctcacttaattgtatatatagaa
ttagaagaaaagacactgatggagaatcttgagaaacttgttcaggaagaaacatgggat
gttgaggaaggaagtcagaataatgttctttccagtagtatgcagttgtttcttataatc
aagaggagcttaaagcgatgcagtgctctgacaaagagccagactttatataatttgttc
agggtgtttcaaagagtcctcaaagcctatgccacaaagctttttgcaagactgccaaaa
ggtggtacagggattgttgctgcagccactggtatggatgggcagataaagacgtctgac
agggatgaaagagtgatctgttatattgtaaattcagctgaatattgccacaaaacgtct
ggtgaactggctgaaagtgtctccaaaatcattgattctcaatttgcagacagggtggat
atgtcagaagtgcaggatgaattttcagcagttataacaagatctttagtaaccctagtg
catggcctggaaactaaatttgatgctgaaatggctgcaatgacacgtgttccatggggt
acccttgaaagtgttggggaccaatcaggatatgtcaatggcataaatatgatccttacc
agcagcattcctgtacttgggagacttctttcacctatttacttccagttcttcttggac
aagcttgcatcatcgcttggcccacggttctacatgaacatattcaaatgcaagcagata
tcagaaactggagcccaacaaatgctgttagatactcaagctgtaaagacaattcttttg
gaaattccttcacttggtcaacagacatctggtgctgctggatattccaaatttgtaagt
cgagagatgagcaaagctgaagcacttttgaaggttatactatctcctgttgattctgtt
gcggatacataccgtgcattgctaccagagggaacaccaatggagttccagcgtattcta
gagcttaagggcctcaagaaatctgaccagcagactatattagatgatttcaacaaagga
gcaccggcaatctcacaaccttcaagtgttgcaccagttagccaagcaacgccacctgcc
cctcccaccaccacagttgcagcgattttgaaccctgcttcagttggattcatagcttct
cgagaggatgtgctaacacgagcagctgcgctcggacgtggtgctgccaccacagggttc
aagaggttccttgctttaacagaagctgcaaaggaccggaaggatggacctttccggaaa
ctcttcaatgcatga
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