Theobroma cacao (cacao): 18606656
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Entry
18606656 CDS
T02994
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18606656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcc03041
]
18606656
03036 Chromosome and associated proteins [BR:
tcc03036
]
18606656
Spliceosome [BR:
tcc03041
]
Complex B
Other components
Prp19-related factors
18606656
Complex C
18606656
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
18606656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
HAT
Suf
TPR_19
TPR_2
TPR_8
TPR_17
Mad3_BUB1_I
RAB3GAP2_C
Wzy_C_2
BTB_2
Motif
Other DBs
NCBI-GeneID:
18606656
NCBI-ProteinID:
XP_007040452
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All DBs
Position
3:34813703..34818282
Genome browser
AA seq
701 aa
AA seq
DB search
MASKDADPSLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPKQ
KITDSTELADYRLRKRKEFEDLIRRVRWNVSVWIKYAQWEESQKDFNRARSVWERALEVD
YRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQI
FERWMSWMPDQQGWLSYIKFELRYNEVERARAIYERFVQCHPKVGAWIKYAKFEMKNGEI
VRARNVYERAVEKLADEEDAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGRAEDLY
RKFVAFEKQYGDKEGIEDAIVGKRRFQYEGEVRKNPMNYDTWFDYIRLEESVGSKERIRE
VYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAGDTERTRDVYRECLKLIPHEKFSF
AKIWLLAAQFEIRQLNLKGARQILGNAIGKAPKDKIFKKYIEIELQLGNIDRCRKLYEKY
LEWAPENCYAWSKYAELERSLSETERARSIFELAITQPALDMPELLWKAYIDFEISEGEY
EQTRGLYERLLDRTKHLKVWISYAKFEASAMEENNGGSDSPQDGVQEEKKECIQRARRVF
ERAINYYRTSAPELKEERAMLLEEWLNMESSFGELGNISLVQSKLPKKLKKRKQITSEDG
GVAGYEEYIDYLFPEENQTTNLKILEAAYKWKKQKISSDDD
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaaagatgcggatccttcactcggatacttgacccggaaagataccgaggtc
aaactccctcgccccactcgagtcaagaacaaaactccggctcccattcagattactgcc
gaacaaatcctccgagaagctcgggaacgacaagaagcagaaatccgaccaccaaagcaa
aagattactgactcgacagaactcgccgactatcgcctccgcaaacgcaaggaattcgaa
gacttaattcgccgtgtgcggtggaacgtcagtgtctggattaagtatgcccaatgggag
gagtctcagaaagacttcaatcgagcacggagcgtgtgggagcgcgctctggaagtcgat
taccggaaccacactttatggctcaaatacgccgaagtggagatgaagaacaaattcatc
aaccacgcaaggaatgtttgggaccgtgccgtcacgctcctgccacgcgtggatcagctc
tggtacaagtacatccacatggaagagatgttagggaacgtcgccggagctcgccagatt
ttcgaacgctggatgtcgtggatgccagatcaacaaggctggctttcttatatcaagttc
gagcttcgttacaacgaagttgaacgcgctcgtgcaatttacgaacggttcgttcagtgt
caccccaaagtcggagcgtggattaaatacgccaaatttgaaatgaagaacggggaaatt
gtacgggcaaggaatgtgtacgagcgggcggtggagaagctggctgatgaagaagatgcg
gagcagttattcgttgcctttgctgagtttgaggaacggtgtaaggaaacagaacgagct
cgttgtatttacaagtttgctcttgatcacataccgaaagggagggcagaggatttgtat
agaaagtttgtggcttttgagaaacaatatggagataaggaagggattgaggatgccatt
gtagggaagaggaggtttcaatatgagggtgaagtgaggaagaatccgatgaattatgac
acttggttcgattatataaggttggaagagagtgtcgggagtaaggagaggattagggag
gtttatgagagggctatagctaatgttcccccagctgaggagaagcggtattggcagaga
tatatttacttgtggattaattatgctttatacgaggagcttgatgctggagatacggag
cgtacgcgagatgtgtatagggagtgccttaagcttattccccatgagaagttctctttt
gcaaagatctggctacttgctgcgcagtttgagataagacaacttaatctcaagggtgct
cgacaaattttaggaaatgctattggaaaggcacctaaggataagatctttaagaagtat
attgagattgagctgcaacttggcaatattgatcgttgccgaaaattgtacgagaagtat
ctagagtgggcacctgagaactgctatgcgtggagcaaatatgctgagttagaaagatcg
ttgtctgaaacagagcgggcaagatctatttttgagcttgccattacacagccagctttg
gacatgccagagttgttgtggaaggcatacattgattttgaaatttcggaaggtgagtat
gaacaaaccagaggattgtatgagaggcttttggatcgtacaaagcacttgaaggtgtgg
attagttatgcaaagtttgaagcctctgcaatggaggagaataatggtggttcagactcg
ccacaagatggggtccaggaagaaaagaaggaatgcattcagcgtgcaagaagagtcttt
gagagagcaattaactactatagaacatcagcacctgaattgaaagaagaacgtgctatg
ctcctggaagagtggcttaacatggaaagcagttttggtgagcttggcaacattagccta
gtccagtctaagttgccaaagaaactcaaaaagaggaagcaaattacaagtgaagatggt
ggtgtggccgggtatgaggaatacattgattatctgttcccagaagaaaaccagaccacg
aatctcaagattttagaagctgcttacaagtggaaaaaacagaagatctcttctgacgac
gactag
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