Tigriopus californicus (tidepool copepod): 131884604
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Entry
131884604 CDS
T09700
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial-like
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00280
Valine, leucine and isoleucine degradation
tcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
131884604
Enzymes [BR:
tcf01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
131884604
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
HlyD_3
RimK
ATP-grasp_3
ATPgrasp_ST
GARS_A
RnfC_N
NQRA
Motif
Other DBs
NCBI-GeneID:
131884604
NCBI-ProteinID:
XP_059088421
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All DBs
Position
8:complement(13909767..13912788)
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AA seq
676 aa
AA seq
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MSHISKLLIANRGEIACRILRTSRRLGLRSVAVVSEADKHALHAQLADEVHCIGPPASQE
SYLRQDKIIQVAKETGAQAIHPGYGFLSENVEFADLCQKSGIIFVGPPASAIRDMGIKST
SKIIMEEAKVPIIGGYHGEDQSPDKLRSEAQKIGFPVMIKAVRGGGGKGMRIAMTEADFE
PQLESAKREAMKSFGDEVMLLEKYVETPRHIEVQVFGDQHGNYVYLFERDCSVQRRHQKI
IEEAPGPGITWEVRKKLGEAAVRAAKAVNYVGAGTVEFIMDKDFNFFFMEMNTRLQVEHP
VSEMITGTDLVEWQLRAAAGEKLPLTQDEIKLNGWSFEARIYAEDPDNGFMPGAGPLQYL
ATPTASDDVRIETGVRQGDEVSVHYDPMIAKLVVWGPDRQSALMKLHSCLSEYNIHGLSS
NVNFLMDLASHPAFVKGQVDTDFIPRHYEELFPKKVVTDTHICQAVLSVVLNESQTPTLL
NANDPFRFETGTRLNHHLIRTLNLNLPDGKTAISPRIIYQGNNQYTVVIGDNQYDVSGRL
VRDDENNFTELTCDIQGKVSKTRVLLQDETIRLFTKDGSVSMSHRLPKFISEQMGGLGLG
DDAVSPMPGVIEKVYVKNGDQVKIGDPLVVMIAMKMEYVIKAPKNGKVLKIGHKVGDFVA
KNTVLVQVEDEKSKLT
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatatttccaagttactgatcgcgaatcgcggcgagatcgcgtgccgcatcttg
cgcacatctcgccgtttgggtttgcgctcagtggccgtggtctcggaggctgacaagcat
gcccttcacgcccaattggccgacgaggttcactgcattggacccccggcctcacaagaa
tcctatctaaggcaagataagatcatccaagtggccaaagaaacgggtgcccaagcgatc
catccaggatatggattcctgtctgagaatgtcgagttcgcggatttgtgccaaaagtcc
ggaatcatctttgtgggacctccagcctcggccatccgcgatatgggcatcaaatccacc
tccaagatcatcatggaggaggcgaaagtgcccatcatcggaggttaccatggcgaagat
caatcgcctgacaagctccgatctgaggctcaaaagatcgggtttcccgtcatgatcaag
gccgttcgtggcggtggcggcaagggtatgcgaattgccatgacggaggccgatttcgag
ccccaattggaatctgccaaacgcgaggccatgaaatccttcggtgacgaggtgatgctc
ttggagaagtacgtggagaccccgaggcatattgaagttcaggtattcggagatcaacat
ggaaattacgtgtacttgtttgagcgtgattgctccgttcaaaggcgacatcaaaagatt
atcgaagaggctcctggaccggggatcacttgggaagtccgaaagaaattgggcgaggcg
gctgtgcgggcagccaaggccgtgaactatgttggagccggaactgtggagtttatcatg
gataaggatttcaacttctttttcatggagatgaacacccggttgcaggttgagcacccc
gtgagcgaaatgatcacgggcacggatttggtggaatggcaactccgagcggcagcgggc
gaaaaactgcccttgactcaagatgagatcaaactgaatggatggtcttttgaggcccgg
atttacgccgaggatcctgacaacggattcatgcctggagcgggtccacttcaatatctt
gccacgcccacagcctccgatgatgtgaggatcgagactggtgttcgtcaaggcgacgag
gtgtcagttcattacgatccgatgattgccaaattggtcgtgtggggccctgaccgtcaa
tccgctctgatgaagctccactcctgcttatccgaatataacattcacggcttgagctca
aacgtgaacttcctcatggatttggcctctcatccggctttcgttaaaggccaggtagac
acggacttcattccccgacactacgaagagctcttccccaagaaagtcgtgaccgacacg
cacatttgccaggcagtactttccgtggtgctcaacgagtcccaaacccctaccctcctg
aacgccaacgatccgttcagatttgaaacgggcactcgtctcaaccaccatctgattcgc
accctcaacttgaacttgcccgatggcaagaccgccattagtccccgaatcatctatcag
ggcaataaccaatacacggtcgtgattggcgacaatcaatatgacgtgtcgggtcgtctc
gttcgtgacgatgagaacaactttaccgagctcacgtgcgatatccagggtaaagtgagc
aaaacgcgggttcttctacaggatgagaccatccgccttttcaccaaggacgggagtgtt
tccatgagccatcggttacctaaattcatctccgagcaaatgggtggattgggactcggg
gatgatgccgtgagtccaatgccaggagtcatcgagaaggtctatgtgaagaatggggat
caagtcaaaatcggcgatcccttggtggttatgattgctatgaaaatggagtatgtgatc
aaggccccgaaaaacggaaaggtgctcaaaatcggtcataaggtgggcgattttgttgcc
aagaacacagttctggtgcaagttgaagatgagaaaagcaaattaacataa
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