Tigriopus californicus (tidepool copepod): 131884821
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Entry
131884821 CDS
T09700
Name
(RefSeq) ecdysone receptor-like
KO
K08536
liver X receptor alpha
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
131884821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131884821
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tcf03310
]
131884821
Transcription factors [BR:
tcf03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
131884821
Nuclear receptors [BR:
tcf03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
131884821
BRITE hierarchy
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
131884821
NCBI-ProteinID:
XP_059088688
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All DBs
Position
8:complement(1210386..1218429)
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AA seq
549 aa
AA seq
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MSGSAPQVTLLQARSQVKAYTTMTGGPPFNGAIPNMMVNSPSGQSMSPVSPHFFGLQPSP
PSSVLSPSLPNQPIYVDTSSPSSQFQASSPLTTEIKSEPPSSYSPPSNGLGFSQGNLSSV
GSPSSQHSSFLVKSESPSSQDYPRMQENERKKKGQVPRPQEEFCTVCGDRASGYHYNALA
CEGCKGFFRRSITKNSTYSCKYGDGCEIDMYMRRKCQACRFKKCYTVGMRAECVVPESQC
QKKRAIKRAQKAAQKGDASSTTAINNGNGNGVGGIGSGVGLNGSHTPNFAGLGLGLTLGT
RSTLSQRHLKPEEEELINRIVYYQDEYENPSEDDLNRVYHVPLQYANDTKGIESESDRLF
QHITEMTILTVQLIVEFSKHLPGFQTLCREDQVNLLKGCSSEVMMLRGARRYDPQRDSII
YANNYPFSKDNYVKAGLSNDTLFRFCRSMCKMKVDNAEYALITAIVIFSERHNVKEPNRV
EKIQEIYVEALQSYVMAKQKKEPMVTFAKLLSVLTELRSLGNSNAKTCFNLRMINRQLPT
FLAEIWDIK
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtagtgctccacaagtgacgctcctgcaagcgaggagtcaggtgaaggcctat
accaccatgacaggggggccacccttcaacggggccatccctaacatgatggtcaactcg
ccctctgggcagtccatgtcgcctgtctcgccgcactttttcggtcttcagccctcgccc
ccctcgagtgtgctgtcgccttccctgccaaaccaacccatctatgtggacacgtcctca
ccctcttcacagttccaggcctccagccctctcaccactgagattaaatctgaacctccc
tcttcctatagtcctccttccaacggcctcgggttttctcaaggcaacctgtcctctgta
ggcagtccaagcagtcagcactcctcattcctcgtcaagagtgagtccccttcatctcaa
gactatcctcggatgcaggagaacgaaaggaagaagaagggacaggtaccccgacctcag
gaagagttctgcaccgtgtgtggagaccgagcctccggctaccattacaacgccttggcc
tgtgaaggctgcaaaggcttctttcgacgctccatcacaaagaattcaacatattcctgc
aagtatggagatggctgtgaaatcgacatgtacatgaggcggaagtgtcaagcctgtcgc
ttcaagaagtgttacacggtgggcatgagggcggagtgtgttgtcccggagagtcaatgt
cagaagaaaagggccattaagcgcgctcaaaaggccgcccagaaaggagatgctagttca
accaccgccattaacaatggcaatggcaatggggtgggaggcattggaagtggtgtgggc
ttaaacggttctcatacgccgaattttgccgggttgggcctgggcctgacactcggcact
cgttccaccctttcccaaagacaccttaagcctgaggaggaagagctcatcaaccgcatt
gtgtactaccaagatgagtatgagaatcctagtgaggacgacctcaatcgtgtataccat
gtgccccttcagtatgccaatgatactaagggcattgagagtgagtcagaccggttgttt
caacacatcacagaaatgacaattctaacagttcagctcattgtcgagttcagtaagcat
ctccccgggttccagacactttgccgggaggatcaagtcaatttgttgaaaggttgttct
agtgaggtgatgatgttgaggggtgcccgacgatacgaccctcaacgagacagtattatc
tatgcgaacaactaccccttctctaaggacaactacgtgaaggccggtctgagcaatgat
accctcttccgcttttgtcgaagcatgtgcaagatgaaggtggataatgccgagtacgct
ctcataactgccattgtcatattcagtgagagacacaatgtcaaagagccgaaccgggtg
gaaaagatccaagagatttacgtcgaggccttgcaatcatatgtaatggctaagcagaag
aaggagcccatggttacgtttgccaagctcctgtccgtcctcaccgagctcagatcgctt
ggcaacagcaatgctaagacgtgcttcaacctgaggatgatcaaccggcaactgcccacc
ttcttggcagagatctgggacatcaaataa
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