KEGG   Tigriopus californicus (tidepool copepod): 131888123
Entry
131888123         CDS       T09700                                 
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B-like
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
tcf  Tigriopus californicus (tidepool copepod)
Pathway
tcf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tcf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131888123
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tcf03019]
    131888123
   03041 Spliceosome [BR:tcf03041]
    131888123
   03032 DNA replication proteins [BR:tcf03032]
    131888123
Messenger RNA biogenesis [BR:tcf03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     131888123
Spliceosome [BR:tcf03041]
 Complex A
  U1 snRNP components
   Sm proteins
    131888123
  U2 snRNP components
    131888123
 Complex B
  U1 snRNP components
    131888123
  U4/U6.U5 tri-snRNP components
    131888123
 Complex C
  U2 snRNP components
    131888123
DNA replication proteins [BR:tcf03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     131888123
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 131888123
NCBI-ProteinID: XP_059092892
LinkDB
Position
10:3797370..3799013
AA seq 183 aa
MVVGRNNKMSAYINYRMRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKLKSKSAKSAE
REEKRVLGLVLLRGENIVSMTVEGPPPADEGMPRVPIPGAGGPGMGRAAGRGVPMGAGGA
APGLSGPVRGVGGPAPSMMAPGGMAVSAPPQMRGPPPAGRGGPPGGFGRGGGPPSGFGRG
FSY
NT seq 552 nt   +upstreamnt  +downstreamnt
atggtggtcggtcgcaataacaagatgtccgcgtacatcaactaccgcatgcgagtgatt
cttcaagattcgcgtaccttcatcggcaccttcaaagcctttgacaagcacatgaacctc
atcttgggcgattgcgaggagttccgcaagctcaaatccaaatctgccaagtctgccgag
cgagaagagaagcgtgtcctcggattggtccttctccgcggcgaaaacatcgtgtccatg
accgtggaaggacctccacccgccgacgaagggatgccccgtgtgcccattccgggggcg
ggtggacctggcatgggtcgggctgccggtcgtggcgtgcccatgggtgcgggtggtgcc
gctccaggtttgtcaggtcctgttcgaggagtgggtggacctgccccctccatgatggcg
ccgggcggtatggcggtgagtgccccgcctcagatgcgaggcccacccccagcgggtcgt
ggcggtcctcctggcggtttcggccgtggtggtggtcctccgtccggctttggccgtgga
ttttcgtattaa

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