Thermomonas carbonis: H9L16_06395 Help Entry H9L16_06395       CDS       T06786                                  Symbol ligD Name (GenBank) DNA ligase D   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism tcn  Thermomonas carbonis Pathway tcn03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:tcn00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     H9L16_06395 (ligD)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:tcn03400]     H9L16_06395 (ligD) Enzymes [BR:tcn01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      H9L16_06395 (ligD) DNA repair and recombination proteins [BR:tcn03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      H9L16_06395 (ligD) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol LigD_N DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S mRNA_cap_enzyme SDR-like Motif Other DBs NCBI-ProteinID:  QNN71566 UniProt:  A0A7G9SUP1 LinkDB All DBs Position 1411230..1413791 Genome browser AA seq 853 aa AA seqDB search MALDDYRGKREFKSTPEPVGRARKRTGARPIFVVQLHHASHRHYDFRLQVGGTLKSWAVP KGPSLDPQVKRMAVEVEDHPLDYAGFEGDIPKGNYGGGHVAVFDRGTWTTDLDVEAQLAK GHLRFELHGEKLKGGWHLVRSGKPARQPQWLLFKQDDAWAGSGEADDMLDDVAPAPAEDA KRARRPGTKTKTVRKPPAPTKKRARSANSGKSDWHAEALELPGARRRKLAATPPVPQLAK LVDDPPDGDDWLHELKWDGYRLVCAIRAGKPSLLSRNALDWSERVSEVRDAIELLGLQEA VLDGELVAGQGSREDFNELQQILSGEIQGTLRYVVFDLLHLEGVDLSEVPLLRRKQLLER LLATAPTRLAYSSHGIGNPSDAFKAAVDAGFEGIVSKRIDATVHPGRSDAWRKTKALGSD EFAVVGYTPPKGSRTGIGALLLATPDEQHGWRYVGRVGSGFNDAQLASLGKRLQGKGSTK PSVHVPENDTDLRQARWFPKPAFVVEVFTRGLGGRGLLRQASFKAMRADKTVASLHDSDL GTASDSKTTEARSVAKKPTKSVRKTGKARQAPELSSPGKLLFPDNGISKQSLADYYSAVM DWLLPEIRDRPLSLVRCPSGIGAQCFFQKHATPGFELVSLVPVTESDGGSEDYLAVTDAA SAMELVQFNAIEFHPWGSKVADLEHADRLVFDLDPDEAVAWKDVIVAARQLRDFLEQAGL QSFVRTSGGKGLHLVVPLAPAAPWERARAFSQAVAEAAREMDPLRYIATASKQKRKGKIF IDWLRNGRGATSIASFSVRARPGAPVAMPLRWEELGKVASGHAFDIRNVPARLKRLKSHP WEGIEKVRQSLPD NT seq 2562 nt NT seq  +upstreamnt  +downstreamnt atggcactggacgactatcgaggcaagcgcgagttcaagtcgacgccggaacccgtcggg cgagcgcgcaagcgcaccggcgcgcgaccgatcttcgtggtccaactgcaccacgcaagt catcgccactacgacttccgcctgcaggtgggtggcacgctgaaaagttgggcggtgccg aaagggccgagcttggatccccaggtcaagcgcatggcggtcgaggtcgaggatcatccg ctcgactacgcgggcttcgaaggcgacattccgaagggcaactacggaggcggtcacgtc gccgtcttcgatcgcgggacatggaccacggatctggatgtcgaggcacaactggcgaag ggacatctgcgcttcgaactgcacggcgaaaagttgaagggcggttggcatctggtgcga tcgggcaagcctgcgcgccagccgcagtggctgttgttcaagcaggacgatgcgtgggcc ggttctggcgaggcagatgacatgctggacgatgtggcacccgcgccagccgaagacgcc aagcgcgcgcgacgtccgggcacgaagaccaagacagtgcgcaagccccctgcacccacc aagaagcgagcgcgctcagcgaacagcggcaagagcgattggcatgccgaagcactcgag ctgccgggcgcacgcaggcgcaagctggcggcaacaccgccggtaccccaactcgccaag ctggtcgacgatccacccgacggcgacgactggctccacgaactcaaatgggatggttac cgcctggtgtgcgcgattcgcgcaggcaaacccagcctgttgtcgcgcaatgcgctcgac tggagcgaacgcgtttccgaagttcgcgatgccatcgaactgctcggattgcaggaggcg gtgctggatggcgaactggtggcgggacagggcagtcgcgaggatttcaacgaactccag cagatcctgtccggcgaaatacagggcacgttgcgctatgtcgtgttcgacctgctgcat ctggaaggcgtggatctgtcggaggtgccattgctgcggcgcaagcagttgctcgaacga ttgctggccacggcaccgacgcggttggcgtacagctcgcatggcatcggcaacccgagc gacgcgttcaaggcggcggtcgatgccgggttcgaaggcatcgtgtccaagcgcatcgac gcgaccgtgcatccgggtcgcagcgatgcctggcgcaagaccaaggcgctcggcagcgac gaattcgcggtggtcggctacacgccgccgaaggggtcgcgaaccggcattggtgcgctg ctgctggcgacgcccgacgaacagcatggctggcgctacgtcgggcgggtcggcagcggc ttcaacgacgcgcaactcgcgtcgttgggcaagcgcttgcagggaaagggctccacgaag cccagcgtgcatgtgccggagaacgacaccgacctgcggcaggcgcgctggtttccgaag ccggccttcgtggtggaagtgttcacccgcggactcggcgggcgcggcttgctgcggcag gcaagtttcaaggctatgcgtgctgacaagaccgttgcatcgctgcatgacagcgatctc ggcacggcgagtgacagcaagacaaccgaggcgaggtccgtggcgaaaaaaccgaccaag tccgtccgcaagaccggcaaggcccggcaggcaccggaactgagcagtccaggcaagctg ctgtttcccgacaacggcatcagcaagcagagcctggccgactactacagcgccgtcatg gactggctgttgccggagattcgcgaccgaccgctgtcgctggtgcgctgtcccagcggc atcggtgcgcagtgctttttccagaagcacgccacgcccggcttcgaactggtgtcgctg gtcccggtcaccgaatccgacggcggcagtgaggactacttggccgtcaccgatgccgcc agtgccatggaactggtgcagttcaacgcgatcgagttccatccgtggggctcgaaggtg gccgatctcgagcatgcggatcggttggtcttcgacctcgatcccgacgaggcggtggcg tggaaggacgtcatcgtcgcggcgcggcagctgcgcgatttcttggaacaagcgggcctg cagtcgttcgtgcgcacgagcggcggcaagggcctgcacttggtggtgccgctggcaccc gccgcaccgtgggaacgtgcgcgcgccttttcgcaggcggtcgcggaggccgcccgcgag atggatccgctgcgctacatcgccaccgcttcgaagcagaagcgcaagggcaagatcttc atcgactggctgcgaaacgggcgcggtgcgaccagcatcgccagcttttcggtgcgcgca cgcccgggtgcaccggtggcgatgccgctgcgctgggaggaactcggcaaggtcgccagc ggccatgccttcgacatacgcaatgtgccggcacgattgaagcggctgaagtcgcatccc tgggagggcatcgagaaggtacgccagtcgttgccggactaa

DBGET integrated database retrieval system