Trypanosoma cruzi: 511055.20
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Entry
511055.20 CDS
T01012
Name
(RefSeq) retrotransposon hot spot (RHS) protein
Organism
tcr
Trypanosoma cruzi
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHSP
RHS_N
Motif
Other DBs
NCBI-GeneID:
3538791
NCBI-ProteinID:
XP_808385
UniProt:
Q4D1Y4
LinkDB
All DBs
AA seq
966 aa
AA seq
DB search
MWRCCGWLHVALLRRRWALIVSPTGVAVRLHGAPTAPPCECHAQRHWDSGTKQPRVYFGA
SGTCWPQLGGASGMLHHTGVVMAPRSGIPGDGSDAATRRGVEAQQPKWTMSSSVEDILLG
GDTLSTDMKLNDFLRNYVGGRAAVGEDHNVTMQVFLQEPDAYVQNQRLLRIIFNLTEYQE
LKILLEAINKLHHEGVVSLEEWRDYEGKDTITPFPKAKLNRVLTKVQTEERLIRAQEMKF
TISTTIEEVLFKGGVRVNEKKLNDFLTRELDGRGVVATNRSVLLKEFFKDPKKYIRVKGV
LSEIQATDAYARMERAVRGEIIFEEDLSKLYKNGVSNLLGWSEAAANVKTTVHKFTKQSL
DAALEEVRKPTTTIAAEKMEGLYESVYNARWSHVVELPDGEEQKKTGMEVKKGKPIHSWT
YKEVGESFEKDDAVRKSGEETPVLMVLTSDKGWPYTLNVLHGAGNDFFVNSEVERVWQIV
LDDLTKWFSNFDLTLNPSPMPRVLIGTPGIGKSMAAGSYLLYQLLHFDVEKLQVVAHCFG
SKMYVFDKTTKTVTKYKGNAISESVLYDLWKSGMKGYIIYDVAKKGTPPETGFAPSTGWG
MIVVSSPEVSNYDEWEKQTKASRIIMNCPDEMDVEAMCAWMKRDETKEKKAGYWKKVKER
MVIVGPIPRHIFDEKIYINRLGAVDGALLGIKPNDVEEYFSLGGEKKWYSEDPSHKLVKI
VRARTVEGAEVFLNASISADIGFRTADCLAKKMATKDILLLILGSRGALASQALEQLGLR
VFMHGEFVSALVKELNELRPSEREAQDSVLKINRQGYPTRTVGLPSMEGGVTRISMEYGV
LYIPAVQNFPLVDGFFFVDSPRKTLVGLQMTTAGAHHTTASTVKQFTECLAEYFEGWDEL
SQDMSWEMIYVQHENSTMITKWQRCGPVNPKNLSDAEKEIVAFWDGKVHQYQFVLTTDFV
NKIREK
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgtggcggtgttgtggttggttgcacgttgctttgctgcggaggcggtgggccttgatt
gtttcaccgacaggcgttgcagtgcggctgcatggcgcaccgacagccccgccgtgcgag
tgccacgcccaacgccactgggacagcgggacgaaacagccgcgagtgtactttggagcc
agcggcacctgctggccgcagttgggcggtgcgagtggaatgcttcaccacacgggtgtt
gtgatggcacctcgaagcggcatccccggcgatggttccgacgctgcaactcgcagagga
gtggaggcgcagcaaccgaagtggaccatgagcagcagcgtagaggacattctgctgggt
ggagacactctcagcaccgacatgaagctgaacgattttcttcggaattatgttggcggc
agggcggccgttggtgaagaccacaacgtgacgatgcaggtgtttcttcaggagccggat
gcttacgtacaaaaccagcggcttcttagaattatttttaatttaacagagtaccaagag
ctgaaaatactattggaggctatcaataaacttcatcacgagggtgttgtctcgcttgaa
gaatggagggactatgaaggaaaggatacaatcactccttttccaaaggcaaaactaaac
agagttctcactaaggtacagacagaagaaaggctaataagagcacaagaaatgaaattt
accatttccactacgatcgaagaagtactgtttaaaggaggagtccgcgtcaatgaaaaa
aagctgaacgactttcttacgagggaattggatggcaggggcgttgtggccaccaatcgg
agtgttttgcttaaggagtttttcaaggatcccaagaagtatatccgtgttaaaggagta
ttgagcgaaatacaggcaacagatgcttatgcgaggatggagagggctgtaaggggcgaa
ataatcttcgaagaagatttaagcaagctttacaaaaatggtgtcagcaatctacttggg
tggtcagaagctgctgcaaacgtaaaaacaactgttcataaattcactaaacaatccttg
gatgcagcccttgaggaggtgaggaaaccaacgacgacgattgcagcggagaaaatggag
ggattgtacgagtctgtgtacaatgcgaggtggagccatgtggtggaacttcccgacggc
gaagagcaaaagaaaacaggaatggaggtgaagaaggggaagccgatacactcatggacg
tacaaggaagttggcgaaagcttcgaaaaggatgacgctgtgcgaaaatccggtgaggaa
actcccgtgttgatggtgctcacctcggacaagggatggccgtacacgctgaatgtgcta
catggggctggtaatgacttttttgttaactctgaggtggagcgagtgtggcagatcgtc
cttgacgatctaaccaagtggttcagcaactttgatttgactctcaatccttcgcctatg
ccgcgtgtgttgattgggacgcccgggatcgggaagtcgatggctgccggttcgtacctt
ctctaccagctgctgcactttgatgtcgagaaactccaagtggttgcccactgttttgga
agcaagatgtacgtgtttgacaaaaccaccaaaaccgtgacaaaatacaagggtaatgca
atatccgagagtgttttgtatgatttgtggaagagtgggatgaaagggtatattatttac
gatgtggcaaagaaaggaacaccgcccgaaacaggttttgcaccctctactggatggggc
atgattgtggtgtcatcgccagaggtaagcaactatgatgagtgggagaagcaaacaaaa
gccagtcgaatcataatgaattgccctgacgagatggatgtggaggcgatgtgtgcatgg
atgaagcgtgatgagactaaagagaaaaaagcgggatactggaagaaggtcaaagaacgc
atggttatagtggggccgattccacgtcacatctttgatgagaaaatttatattaatcgc
ttgggtgccgttgatggtgctttgttagggatcaaacctaatgatgttgaagagtacttt
tccctgggaggagagaaaaaatggtattccgaggatccgtctcacaaacttgtgaagatc
gtccgggcaagaacagttgaaggtgctgaggtatttctcaatgcatcaataagtgctgat
atcgggtttcgaactgcggactgtttggcaaagaaaatggctacgaaggatattttgttg
ctaatattggggtcgcgtggtgctcttgcttcccaagctctggaacaattgggtttgcgc
gtattcatgcatggggagtttgtcagtgcactagtaaaggaactaaatgagctgaggcca
tcagaacgtgaagcacaggattcggtgctgaaaataaaccgtcaaggataccccactcgc
accgttggattaccgtcgatggagggcggtgtcacgaggatttcgatggagtacggggtg
ctgtacataccggcggtccaaaactttccgctggtggacggctttttctttgttgattcg
ccgcggaagacgctggttgggctgcagatgacgacggcgggtgcgcatcacaccaccgcc
agcactgtgaagcagttcactgagtgcctggcggaatattttgaaggatgggacgaatta
tcccaagacatgtcgtgggagatgatttacgtgcagcacgaaaacagcacaatgataacg
aaatggcagagatgtggtcccgtcaatcccaaaaatttgagcgacgcggaaaaagaaatt
gtggcgttctgggacggaaaggtacaccaataccagtttgtgttgacaactgattttgta
aataaaatccgagaaaagtga
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