Trypanosoma cruzi: 511121.11
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Entry
511121.11 CDS
T01012
Name
(RefSeq) retrotransposon hot spot (RHS) protein
Organism
tcr
Trypanosoma cruzi
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHSP
RHS_N
Motif
Other DBs
NCBI-GeneID:
3535013
NCBI-ProteinID:
XP_805325
UniProt:
Q4CT72
LinkDB
All DBs
AA seq
913 aa
AA seq
DB search
MSGRPEEGLYDNEEIQVPTVPQGDIRRRARLESNSGTDQPAATRRRVEERRPQWTMSSRV
EDILLEGSAPRTNMKLNDFLRSNLGDEWVVDTNENVTMQEFFQDPETFIQDKGLLRIITA
LSSYQVLEAINKLHPEHVFSLEQWRDYEGKDTVTPLARGKLNAVLTQVQRESREAEERLR
REEEERRRRAQEMKFTISTTIEDVLFRGEFRYKEMKLNDFLLLRFGRRGVVATNRSVLLE
EFFKEPTKYIHDAGVLGEIQATGAYARMEKIVKDEMVFDEDIKKLHYTHVSALLGWLVAA
PEVKEIVHRITKQSLDAALEDVRISMRTSAAMKLEGVYESVYNARWSHLVEVPGGEGTGL
EVREGKPPQPWTYRAVGRTLEKNDAVQQSGAARLRLMVLTSDKGWPCTWNRKGVEFTRDC
YVNCEVDRVWQIVKGDLTKWFSSHGKADFEPKRRVLIGTPGIGKSMAAGSYLLYQLLHYD
AKKLPMVVYFIADRKFLFDKTSRTVSTYMGDSSNESFVRSLSDRGMKGYIIYDVAEPDDE
PSGDLPPRGWGMVLVSPPLEGNYKEWVKWSDATTIVMNCPGESDVKAMCVWMRRHQPVRE
QAEYWHVVKGQMDEVGPIPRYIFDERKYYNWVQRCHKTVDEATSSVILQYSGLGRGGSWD
HMKVLYWLARVVRVRDGKFGSEFFFNLPVSAHLGNKTLFKSAKLMQQHYFNLLISGLTDY
LISENFGRCTVFAFLNGSFVRAIERRLRELRPSPQRQSHRCALAVYSQKRSTRHHVLPPL
EHVSERIDVECGVLYIPEVENFPLVDAFFFVKLNPMTLVGLRMATAGGHHTTASTARQFT
EYLAEYFNGWDELSRKLSWEIIYVQHAESTPMNDWQRCDVVDANNVSDDEKRLRRSGTKR
CASTKCPYHPKNA
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaaggcccgaggaaggactttacgataatgaggaaattcaagtgcctactgtc
ccgcagggagatattcggaggagagcgaggctggagtccaatagtggtacagatcaaccc
gctgcgactcgcagaagagtggaggagcggcgaccacagtggaccatgagcagcagagtg
gaggatattctgctggagggaagcgctcccaggaccaacatgaagctgaacgatttcctt
cggagcaacttgggcgatgagtgggttgtagacaccaatgagaacgtcacgatgcaggag
ttttttcaggatcccgagacgtttatccaagacaaagggttattacgcataataacggca
ttgtcgtcataccaagtgctggaggctattaataagcttcatcccgagcatgtgttctct
cttgagcaatggagggactatgagggaaaggatacagtcactcctcttgcaaggggaaaa
ctaaacgcagttctcactcaggtacagagagaaagccgtgaggcagaagaaaggctaaga
cgtgaggaagaagaaaggcgaagacgagcgcaagaaatgaaatttaccatttccactacg
atcgaagatgtactgttcagaggggaatttcgctacaaggaaatgaagcttaacgatttt
cttctgctgagatttggcagaaggggcgttgtggctaccaatcggagtgttttgctggag
gagttttttaaggaacccacgaagtatatccacgatgcgggagtactgggcgaaatacag
gcaacgggtgcttatgcgaggatggagaagattgtaaaggatgaaatggtttttgatgaa
gatataaagaagctccactatactcatgtaagtgctctgctggggtggctagtagctgct
ccggaggtaaaagaaattgttcatcgcatcactaaacaatccttggatgcagcccttgaa
gacgtgagaatctcaatgaggacgagtgcagcgatgaaactggagggagtgtacgagtct
gtgtacaatgcgaggtggagccatttggtggaagttcctggcggcgaggggaccggactg
gaagtgagagaggggaagccaccacagccatggacgtacagggcagttggccgaactctc
gaaaagaatgatgctgtgcagcaatccggtgcagcgcgtctcaggctgatggtgctcacc
tcggacaaggggtggccgtgcacgtggaatcggaagggggtggaattcactcgtgactgc
tatgtgaactgtgaggtggatcgagtgtggcagatcgtcaagggcgatctaaccaagtgg
tttagcagtcacggtaaggccgactttgagcctaagcggcgtgtgttgattgggacgccc
gggatcgggaagtcgatggctgccggctcgtacctcctctaccagctgctgcactacgat
gccaagaagctcccaatggttgtttactttattgcggatcgaaaattcctgtttgacaag
accagcaggacggtgtcgacatacatgggcgactccagtaatgagtcttttgtgaggagt
ctttctgaccgtgggatgaaggggtatattatttacgatgtggcagagccggatgatgaa
ccgtctggtgatttgcctcccaggggatggggcatggttttggtgtcacccccactcgag
gggaactacaaagaatgggtgaagtggagcgatgccacaacaatagttatgaattgccct
ggtgaaagcgatgtgaaggcgatgtgcgtttggatgaggcgccatcagcccgtgcgggag
caagcggagtactggcatgtggtgaagggccaaatggatgaagtgggacctattccacgt
tatatctttgacgagcgaaagtattataactgggttcaacggtgtcacaagaccgtcgat
gaggcgacctcttctgtaatcttgcaatacagtggtttgggacgtggtggatcctgggat
catatgaaggtgctctactggcttgcgagggttgtccgagtacgagatggaaagtttggt
tctgaattttttttcaatttaccggtgtctgctcacctcggaaataaaacattattcaag
tcggcgaagttaatgcagcagcattattttaatttactcatatcggggctgacggattat
ctcatatcagaaaattttggaaggtgcaccgtgtttgcatttttgaatggatcttttgtg
cgtgcaatagaacgcaggctgagggagctgaggccatcaccacaacgtcagtcccaccgc
tgtgcgctggcggtgtactcacagaagcgctccaccaggcaccatgtcttaccgccactg
gaacacgtttctgagaggattgatgtggagtgcggggtgctgtacataccggaggtggaa
aactttccgctggtggacgcctttttctttgtgaagttaaatccaatgacgctggttggg
ctgcggatggctacagcgggtgggcatcacaccaccgccagcactgcgaggcagttcact
gagtatctggcggaatattttaatggttgggacgagttgtcccgaaaactgtcgtgggag
attatttatgtgcagcacgcagaaagcacgccgatgaacgactggcagagatgtgatgtc
gtcgatgccaataatgtgagcgacgatgaaaaaagattgcggcgttctggaacgaaaagg
tgcgccagtaccaagtgtccatatcatccgaagaacgcc
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