Pseudoduganella chitinolytica: PX653_00600
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Entry
PX653_00600 CDS
T08857
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
tct
Pseudoduganella chitinolytica
Pathway
tct00061
Fatty acid biosynthesis
tct00071
Fatty acid degradation
tct01100
Metabolic pathways
tct01212
Fatty acid metabolism
tct02024
Quorum sensing
Module
tct_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tct00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PX653_00600
00071 Fatty acid degradation
PX653_00600
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PX653_00600
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tct01004
]
PX653_00600
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tct04147
]
PX653_00600
Enzymes [BR:
tct01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PX653_00600
Lipid biosynthesis proteins [BR:
tct01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
PX653_00600
Exosome [BR:
tct04147
]
Exosomal proteins
Exosomal proteins of breast milk
PX653_00600
Exosomal proteins of breast cancer cells
PX653_00600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
DUF4880
Motif
Other DBs
NCBI-ProteinID:
WEF33325
LinkDB
All DBs
Position
141964..143541
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AA seq
525 aa
AA seq
DB search
MSHFIDTIRTTMRERAGAVAIVQLGGRASPERVVTYGTLAEECNALAAALASHCTPGATV
GLVAANSVAWIEADLALLLGGHVEVPVPLAFSAEQAAHLLASCSVVLTDDAGQRRFEQWR
AAAPQAFQAVPCFSIGQLIDGGGVVPALAVDTATDRVCKVIHTSGTTSSPKGVRIRAHGL
DALLASLWRHATREDYARYLNLVPFSLLIEQVTALYLPFMAGGTVVLPPVGEAPLGDPGA
LAADKLALLQRACPTAVTLPPSLVEALAGAADRWPDLGTEALCEALFGRATPPLIAAGGA
PVAAATIARLAQRGIVVLQGYGLSENSSVVSWNTRAANRIGSVGKPLPHVACKLGPDGEL
AIRSASLFAGYSGSDPSACHTDAEGWLWTGDLAEIDADGYITIIGRKKNLIITAHGRNVS
PEPAEASYRSVAGVADIVLLGEGQETLSAFVLTAAGADPVALRHELERHGERWLSGVERA
STFVFEADAPALRASLFTVTGRPRRPDVERHVRARVAATNMPHQL
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgagccacttcatcgacaccatccgcacgacgatgcgcgaacgtgccggcgccgtcgcg
atcgtccagttgggcggcagggcgtcgcccgagcgggtcgtcacctacggcacgctggca
gaggagtgcaacgcgctggcggccgcgttggcctcccactgtacgccgggcgccaccgtc
ggcctggtggccgcgaattcggtcgcatggatcgaggccgacctggcgctgctgctgggc
ggccatgtcgaggtgccggtaccgctggccttcagcgcggaacaggccgcgcacctgctg
gcctcgtgcagcgtcgtgctgaccgacgacgcaggccagcgtcgcttcgagcaatggcgc
gccgccgcgccgcaggcgttccaggcggtgccgtgcttctcgatcggtcaactgatcgac
ggcggcggcgtggtcccggccctggccgtcgacacggcaacagaccgggtctgcaaggtg
atccacacatccggcaccaccagctcgcccaagggtgtgaggatccgcgcgcacggcctg
gatgcgctgctcgcatcgctgtggcggcacgccacgcgggaggactatgcgcgctacctg
aacctggtgccgttcagcctcctgatcgagcaggtgacggcgctgtacctgccgttcatg
gccggcggcaccgtcgtgctgccaccggtcggcgaagcgccgctgggcgatccgggcgcg
ctggcggccgacaagctggcgctgttgcagcgtgcctgtcccaccgcggtgacattgccc
ccttcgctggtggaagcgctggccggtgcggcggaccgctggccggacctgggcaccgaa
gcgttgtgcgaggcactgttcggccgcgccacgccgcctctcatcgcggccggcggcgca
ccggttgccgcggccaccatcgcgcggctggcgcagcgcggcatcgtcgtgctgcagggg
tatggcctgagcgagaacagctcagtcgtctcgtggaacacgcgggccgcgaaccgcatc
ggcagcgtcggcaagccgctgccgcacgtggcctgcaagctggggccggacggtgaactg
gccatccgcagcgcttcgctgtttgccggctacagcggcagcgatcccagcgcctgccat
accgatgcggaaggctggctgtggacgggcgacctggccgagatcgatgccgacggctac
atcacgatcatcggccgcaagaagaacctgatcatcacggcgcacggccgcaatgtgtcg
ccggaaccggccgaggcgtcgtaccgcagcgtggcgggcgtggcggacatcgtgctgctg
ggcgaagggcaggagacgctgtcggccttcgtgctgacggccgccggcgccgatcccgtc
gcgctgcgccacgaactggaacggcacggcgaacgctggctgtccggcgtggagcgcgcc
agcaccttcgtgttcgaagccgatgcgccggcgctgcgcgccagcttgtttaccgtcacg
ggtcggccgcgccgcccggacgtggagcgccacgtgcgcgcccgggtggccgccaccaac
atgcctcatcaactttaa
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