Pseudoduganella chitinolytica: PX653_16925
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Entry
PX653_16925 CDS
T08857
Name
(GenBank) carbohydrate binding domain-containing protein
Organism
tct
Pseudoduganella chitinolytica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_25
CBM_20
fn3
RGI_lyase
GspA_SrpA_N
Glyco_hydro_57
Big_13
Big_7
Motif
Other DBs
NCBI-ProteinID:
WEF31149
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All DBs
Position
3828099..3831983
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AA seq
1294 aa
AA seq
DB search
MQLNKKPLALCLAAAFSAALPATGSAGTIPAAHVYHNHMPNFWPFYAVDVLAKYNATPLG
GPIRYTYDGEVINLKNNPPSGYHYYLPASLGGAIMPHDDLVSYYSHDAKTGAYQYWPMQV
ANEMQSHSAARGQVHVTMSGAVINNVQSLTTLQNVPGYSNSGWGQGWANTFGSLKTANNF
PTLDTVHFTGHHSMGPLVGPEYFLKDLIYQNVTLAQPYFLGGKFVSSRGFFPTELGFSDR
LIPTLAKLGIQWSVIGNNHFSRTLKDYPFATYDATGDTLTSPPNRADLRNTSPTGSWVAN
QMAHEKQVVVNKFPFASTPHWVRHVDPATGAVSKIAGIPVSQNGSWYEGWEGSVTVDEIA
PYQSLEPRQFFVVAHDGDNSSGRAGSLGTWQAGHGTTCSGNGYCLGIDEYLKAKPIPAGD
VQHVQDGSWIDTRDSSSDPTWYHWRLPFLIWKGQFADFNRVNGLNLAPKNNLSGQQEGAT
VSFEYGWHYLERNFALLQAALNYAKTAEQVWLDAHPSHWQPSTALDRQVTHAGNQLNPWM
LSYPVKGDPEADYAGGANPAELGWYFLLPAMDSGFGYYDENKDDSVKPTLAFNNSMAFTK
PYVQARVAQDRTGPSAWWPQRYPYNPGSVNGSKAEGWTVQHYSNDFALYTYAHDVSGIVS
AKAMVRVHASKDISATDDTYKVYDPAALAGTPGLSITPSNVGAWRAYDMTVRDLQPDING
VAWNAATRDTLAVLPAQEIGDLYYVYLSDYRNQLLDYYVELTDARGNVTKTEIQQVYVGA
GRYRATPGAGSGYVEDSNGTVNGVYPFLVVDKAAPSVPGVPSSTAVSDRSVTLAWAAAAD
NVAVTGYRVYRNGAQVGTTGGTSLTDSGLAPATAYTYTVQAYDAAGNQSAQSKALVVTTR
AADTTAPTAPGQPAATAITSSSLTLSWSAATDNYGVSDYVIKRNGVQVGVSTGTAFNDSA
LAPSTAYSYTVHARDAAGNVSPASAARSVTTAAGHVATVYYKLGTNWSIANLHYAPVGGT
WTAVPGAPMATACSGWAMLTVNLGSATGLTAAFNNGSGNWDNNGGKNYALASGISAVSGG
IVTTGANPCTPDTTAPTVPGGLTATAVDAGTVRLTWAASTDNVAVTGYYVFRNGTQIGTI
AAGTSYTDSTAAAATTYSYTVKAFDAVPNVSAASTAATVTTPASGSTCQVKFTIANANTV
TGQNLRAVGNLAGLGNWAPASGAALAIQGSGANVPWTGTVALPANASVQYKYVKWNGSTA
TWESSQATTSGNRELTTPATCSGVIDRNDGSFKF
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcaacaagaaaccgctggccctgtgcctcgcggccgccttctccgccgctctg
cctgcgacaggcagcgccggcaccattccggccgcccacgtgtaccacaaccatatgccg
aacttctggccgttctatgcggtcgacgtgctggccaagtacaacgcgacgcccctcggc
gggccgatccgctacacatacgatggcgaagtgatcaacctgaagaacaatccgccatcg
ggttatcactactatctgcccgcctcgctgggcggcgcgatcatgccgcacgacgacctg
gtcagctactactcgcacgatgccaagacgggcgcctaccagtactggcccatgcaggtc
gccaacgaaatgcagagccactccgccgccaggggccaggtgcacgtgacgatgtccggt
gccgtcatcaacaacgtgcaaagcctgaccacgctgcagaacgtgcccggctacagcaac
agcggctgggggcagggctgggcgaatacgttcggcagcctgaagacggccaacaatttc
ccgacgctggacacggtccactttacgggacatcacagcatgggcccgctggtggggccg
gaatacttcctgaaagacctgatctaccagaacgtcacgttggcgcagccctatttcctc
ggcggtaaattcgtctcgtcgcgcggatttttcccgacggagctgggcttttcggaccgc
ctgattcccacgctggccaagctgggcatccagtggtcggtgatcggcaacaaccatttc
tcgcgcacgctgaaggattaccccttcgccacgtacgacgcgaccggcgatacgctgacg
tcgccgccgaaccgcgcggacctgcgcaatacgtcgccgaccggcagctgggtcgccaat
cagatggcccacgagaagcaggtggtcgtgaacaagttcccgttcgcgtccacgccgcac
tgggtgcggcacgtcgatccagccaccggggcggtcagcaagatcgccgggatccccgtc
agccagaacggttcctggtacgagggctgggaaggctccgtgacggtggacgagatcgcg
ccctaccagtcgctcgagccgcgccagttctttgttgtcgcgcacgacggcgacaactcc
agcggccgtgccggttcattgggcacatggcaggccggccacggcaccacctgcagcggc
aacggctactgcctgggcatcgacgaatacctgaaggccaagccgatcccggcgggtgac
gtccagcacgtgcaggacggctcatggatcgatacgcgcgactcctcgtccgacccgacc
tggtaccactggcggctgccgttcctgatctggaaaggacagtttgccgacttcaaccgt
gtcaacggcctgaacctggcaccgaagaacaacctgtccggccagcaggaaggggcgacc
gtgtcgttcgagtacggctggcactacctggagcgcaacttcgcgctgctgcaggcggcc
ctgaactacgccaagaccgccgagcaggtgtggctggacgcgcacccgagccactggcag
cccagcaccgcgctggaccggcaggtcacccatgccggcaaccagctcaatccgtggatg
ctgtcctaccccgtcaagggcgatccggaggccgattacgcgggcggcgccaacccggcc
gagctgggctggtatttcctgctgccggcgatggactccggcttcggttactacgacgaa
aacaaggatgacagcgtgaagccgaccctcgccttcaacaactcgatggcgttcacaaag
ccctacgtccaggcccgcgtggcacaggatcgaacaggaccgtccgcatggtggccccag
cgctatccgtacaatcccggctccgtcaacggctccaaggccgagggctggaccgtgcag
cactacagcaacgacttcgcgctgtacacctatgcccatgacgtctccggcatcgtcagc
gccaaggcgatggtgcgggtacacgcaagcaaggacatcagtgcaacggacgatacctac
aaggtgtacgacccggccgcgctggcgggcacgccgggcttgtcgatcacgccgtcgaac
gtcggggcctggcgcgcctacgacatgaccgtacgcgacctgcagcccgacatcaacggt
gtcgcgtggaacgcggccacgcgcgacacgctggcggtgctgcccgcgcaggagatcggc
gacctctactacgtctacctgtccgactaccgcaaccagctgctcgactactacgtcgag
ctgacggacgcgcgcggcaacgtgacgaagacggagatccagcaggtctacgtcggtgcc
ggcagataccgggccacgcccggcgccggttcgggctatgtcgaggacagcaatggcacc
gtcaatggtgtctatccgttcctggtggtcgacaaggctgccccttctgtcccaggcgtc
ccctcctccaccgcggtgtcggaccgttccgtgaccttggcctgggcggcagccgccgac
aacgttgccgtgaccggctaccgggtctaccgcaacggcgcgcaggtcggcacgacgggc
ggcaccagcctgacggatagcggattggcgcccgccaccgcgtacacctataccgtgcag
gcctacgatgccgccggcaaccagtccgctcagagcaaggccctggttgtgacaacccgc
gccgccgatacgaccgcgccgacggcgcccggacagccggccgctaccgccatcacctcc
agctcgctgacgctaagctggagcgcggccaccgacaactacggcgtcagcgactatgtc
atcaagcgcaatggcgtccaggtcggcgtcagcaccggcactgcgttcaacgacagcgcg
cttgcgccgtccaccgcctacagctacaccgttcacgcacgtgacgcggcaggcaacgtg
tcacccgcgtcggcagcgcgctccgtgaccacggccgccggccatgtcgcgaccgtctac
tacaagctcggcaccaattggagcatcgccaacctgcattacgccccggtcggcggcacg
tggacggccgtgcccggcgcccccatggctactgcgtgcagcggttgggccatgctgacg
gtaaatctgggcagcgcgacaggtttgacggccgcattcaataatggttccggcaactgg
gacaataacggcggcaagaactatgcgctggccagcggcatctcggccgtttccggcggt
atcgtcacgacgggtgctaatccttgcaccccggatacgacggcgcccaccgtgccggga
ggcttgaccgctaccgccgtcgacgccggcacggttcgcctgacgtgggcagcctcgacc
gacaacgtcgcggtgacgggctactacgtgttccgcaacggcacgcagatcggcaccatc
gccgcgggcacgagttataccgacagcacggcagcggccgccactacgtacagctacacc
gtaaaggcattcgacgccgtacccaacgtatccgccgccagtacggcggccacggtgacg
acgcctgcgagcggcagcacgtgccaggtgaaattcacgattgcgaacgccaatacggta
acgggccagaacctgcgggccgtgggcaatctagccggactggggaattgggcgccggcc
agtggcgcggcgctggccatccagggcagcggcgccaacgtgccctggaccggtaccgtc
gccctgcccgccaatgcgagcgtgcagtacaagtacgtgaagtggaatggcagtacggct
acgtgggagagcagccaggcgacgacgtcggggaaccgcgagctcaccacgccggcaacg
tgttctggtgtgatcgaccgtaacgacggcagcttcaagttctga
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