Thermomonospora curvata: Tcur_1208
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Entry
Tcur_1208 CDS
T01127
Name
(GenBank) DNA polymerase LigD, ligase domain protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
tcu
Thermomonospora curvata
Pathway
tcu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Tcur_1208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcu03400
]
Tcur_1208
Enzymes [BR:
tcu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
Tcur_1208
DNA repair and recombination proteins [BR:
tcu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Tcur_1208
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
ACY96791
UniProt:
D1A995
LinkDB
All DBs
Position
complement(1364878..1365828)
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AA seq
316 aa
AA seq
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MLAATGDLPEDADRWCLELKWDGVRVVCHVTPHGVRAAGRRGADVTGRYPELSGLVDLVP
GREAVLDGEVVAFRHGRPSFERLQRRMHLDRPDPRLVRQVPVRYVVFDVLYLDGRPLYDL
PYLQRRQLLEELDLAGAGPFEAPPHLHAADTDQVKELVEYTWEQRLEGVVAKRVDSPYRP
GRRVDFWRKVKNFQTRDVIICGWKPGRGRREGGFGSLLLGAYDDGGALRFTGQVGTGFTD
RALEDIYERLWPLRCLTSPYDELLPRELARDAQWVEPVLVGEVAYGVWTREGHLRAPSWR
GLRDDKDPREVTYEPR
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgctggccgccaccggtgacctgccggaggacgccgaccgctggtgcctggagctgaag
tgggacggcgtgcgcgtcgtctgccacgtcaccccccacggcgtgcgggccgccggacgc
cgcggcgcggacgtcaccggccgctacccggagctgtccgggctggtggacctggtgccg
ggccgcgaggccgtcctcgacggcgaggtggtggccttccggcacggccggcccagcttc
gaacggctgcagcggcgcatgcacctcgatcgccccgacccccgcctggtccgccaggtg
cccgtccgctacgtggtgttcgacgtgctctacctggacggccgccccctctacgacctg
ccctacctgcagcggcggcagctgctggaggaactggacctggccggcgccggccccttc
gaggccccgccccacctgcacgccgccgacaccgaccaggtcaaggaactggtggagtac
acctgggagcagcgcctggagggcgtggtcgccaaacgggtggactccccctaccggccc
ggccggcgggtggacttctggcgcaaggtcaagaacttccagacccgcgatgtgatcatc
tgcggctggaagcccggccgcggccgccgcgagggcggcttcggctcactgctgctgggc
gcctacgacgacggcggggcgctgcgcttcaccgggcaggtcggcaccggcttcaccgac
cgggcgctggaggacatctacgagcggctgtggccgctgcgctgtctcaccagcccttat
gacgagctcctcccccgcgagctcgcccgcgacgcccagtgggttgaaccggtcctggtg
ggggaagtcgcctacggcgtgtggaccagggaggggcacctgcgcgccccgtcctggcgc
ggcctgcgcgacgacaaggacccccgggaggtcacctatgaaccccgctga
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