Hydrogenovibrio crunogenus: Tcr_1987
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Entry
Tcr_1987 CDS
T00296
Name
(GenBank) replication restart DNA helicase PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tcx
Hydrogenovibrio crunogenus
Pathway
tcx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Tcr_1987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcx03400
]
Tcr_1987
Enzymes [BR:
tcx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tcr_1987
DNA repair and recombination proteins [BR:
tcx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Tcr_1987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
PriA_CRR
Helicase_C
AAA_30
zinc-ribbons_6
AAA_11
AAA_19
PIF1
T2SSE
Cas_Cas2CT1978
Motif
Other DBs
NCBI-ProteinID:
ABB42577
UniProt:
Q31E46
LinkDB
All DBs
Position
complement(2184370..2186694)
Genome browser
AA seq
774 aa
AA seq
DB search
MFVKVAVPGPFLSPLDYRIQAEKADHRIETLALDLEPEEQTESKKSFLPVVGGRVKVPFR
NKSLIGIVMALSDDATVATQKLKALEDVIDEMPIFSEQEMALLSWASHYYHEPIGNVVQT
ALPKRLREGEAVDVAGVSAWQLTEAGREADEQIPSRATQQKALWQLLQQQDEALTAEVLN
RSLNQWRLPMKRFQEKGWVAETEKSCLHAMPVREKTARPGHILNAEQQAAVDAVLATSGF
DAFLVEGVTGSGKTEVYLGMIESVIAQGKQVLVLVPEIGLTPQTVKRFEAYLQAPVAVMH
SGLNDKERHCAWSLVKTHQVNVLLGTRSAIFTPFADLGLCIMDEEHDLSFKQQDGFRYSA
RDCLVRRAQLENVPVVLGSATPSLETLHNALSGRYQHLHLKQRAGQAKMPEVQLLDVRGQ
AEEEGISQPLRQEVETHLKAGGQVLLFLNRRGFAPVLMCHDCGWQAACPSCDANMTFHQQ
VNELRCHHCGYQAKAPLDCPNCGSASFAKIGQGTERLETVVQQWFPDYKVLRVDRDTTRN
KGQMMALTEQASQGRADILIGTQMLAKGHHFPKVTLVGLLDIDQGLFSCDFRAAERMAQL
VVQVSGRAGRGERPGQVVIQTHHPEHPLLKVLVARGYEAFAKEALKEREQADLPPYQYQV
LLRAEAVDANAGWTFLNDVKSALNFAKMSMLRSYLSVNDSDDIKAEMLQGLEVFGPVSAP
MLRRQGRYRYQLLLQGAHRGFLHQWLAQVETQLYTSNQAKKVRWSLDVDPQEMS
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgttcgttaaagttgccgtgcccggcccttttttatcccctttggattatcgcattcag
gctgaaaaagcggatcatcggatagaaacattggcgttggatttagaaccggaagagcag
acagagtctaaaaaatcttttttgcctgtggtcggcgggcgtgtcaaagttccctttcgc
aataaatctttgattggcattgtgatggcgttaagtgatgacgcgacggttgccactcaa
aagctcaaagcgcttgaagatgtaattgatgaaatgccgattttttctgaacaggaaatg
gcgttactcagttgggccagtcattattaccatgagccgattggcaacgtcgtgcaaaca
gcccttccgaaacgattaagagaaggcgaggcggttgacgtggctggcgtgtcggcatgg
cagttgaccgaggccgggcgagaagcagacgaacagataccgtctcgagccacgcaacaa
aaagcgttatggcaactgctgcaacagcaagacgaggcgctgacagcggaagttttaaac
cgctctttgaaccaatggcgccttcctatgaaacggtttcaggaaaagggctgggtggct
gaaactgaaaaaagttgcctgcatgccatgccggtgcgtgaaaaaacagccaggcctggt
catattttaaatgccgagcagcaagctgcggtggatgcggttttggcaacgtctggattt
gatgcttttctggtagaaggggtgacaggcagcggtaaaacggaagtctatctaggtatg
attgaatcggtcatagcccaaggaaaacaagtgttggtgttggtaccggagattggatta
acaccgcaaacagtgaaacgatttgaagcgtatttgcaagcgcctgttgccgtgatgcac
tctggccttaatgataaagagcgtcattgcgcctggtcgttggtgaagacgcatcaagtg
aatgttttactgggaacgcgttcagcgatttttacgccctttgcggatttagggttgtgc
attatggatgaagagcatgacttatcctttaagcagcaagatgggtttcgctattcggct
cgtgactgcttggttcgtcgagctcagttggaaaatgtgccggtggtattagggtcggca
accccgtctctagaaaccttgcataatgcgttaagcggacggtatcaacatttgcattta
aagcagcgagcaggccaggccaaaatgcctgaggttcaattgttggatgttcgcgggcaa
gctgaagaagaaggcatctcccaaccgttaaggcaggaagtggaaacccatttaaaagcc
ggcgggcaagtgctgttatttttaaatcgacgaggctttgcgccagtgttgatgtgccat
gactgtggctggcaagcggcttgcccgagttgtgatgccaatatgacctttcatcagcaa
gtgaatgaacttcgttgccatcactgtggctatcaagcaaaagcaccgttggactgtcca
aattgtggttcggcttcctttgctaaaatcggtcagggcacggagcgattggaaacggtg
gtccagcaatggtttcctgattataaagtcttgcgagtggatcgcgacacgacgcgtaat
aaaggtcaaatgatggctttgacggaacaagccagtcaaggtcgagccgatatcctcatc
ggtacccagatgttagcaaaagggcatcattttccaaaagtgacgttggtcggattactt
gatattgatcaaggacttttcagttgtgactttcgtgcggccgaacgtatggcacaatta
gtggtgcaagtctcaggccgagccggacgaggggaacggcccggtcaggtggtgattcaa
acgcaccaccctgaacacccgttattgaaagtgttggtggcgcgtgggtatgaggcgttt
gcgaaagaagctttaaaagagcgtgaacaagccgatttgccgccttatcagtaccaggtg
ttattgcgagccgaggcggtggatgcgaatgcgggctggacatttttaaatgacgttaaa
agtgcattgaactttgctaaaatgtcgatgttgcgttcgtatttatcagtaaacgattca
gacgatattaaggcagagatgttacaggggctggaggtgtttggtcctgtgagtgctccg
atgcttcgtcgtcaagggcgataccgttatcagttgttgttacaaggtgcgcatcgtggc
tttttacatcaatggttggctcaggttgaaacgcagctttatacgtccaatcaagctaag
aaagttcgttggtcgttagatgttgatccacaggaaatgagttaa
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