Thiomicrospira cyclica: Thicy_0014
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Entry
Thicy_0014 CDS
T01517
Name
(GenBank) quorum-sensing autoinducer 2 (AI-2), LuxS
KO
K07173
S-ribosylhomocysteine lyase [EC:
4.4.1.21
]
Organism
tcy
Thiomicrospira cyclica
Pathway
tcy00270
Cysteine and methionine metabolism
tcy01100
Metabolic pathways
tcy01230
Biosynthesis of amino acids
tcy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tcy00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Thicy_0014
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Thicy_0014
Enzymes [BR:
tcy01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.21 S-ribosylhomocysteine lyase
Thicy_0014
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Motif
Pfam:
LuxS
Motif
Other DBs
NCBI-ProteinID:
AEG30790
UniProt:
F6DB50
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All DBs
Position
complement(12259..12780)
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AA seq
173 aa
AA seq
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MPLLDSFRVDHTIMPAPAVRVAKTMTSPKGDTITVFDLRFCRPNKEILGERGIHTLEHLF
AGFIRQHLNGDGVEIIDVSPMGCRTGFYMSLIGEPDEQRVAQAWLAAMQDVLAVKTEADI
PELNVYQCGTCTMHSLDEAKAIAQAIIDQNIGVMKNEDLLLSADQLRELGNAV
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgccattacttgatagcttccgagttgaccacaccattatgcctgcgcccgctgtgcga
gttgccaaaaccatgacatcgcctaaaggtgacactattaccgtattcgatttacgtttt
tgtcgtcccaacaaagagattttaggcgagcgtggtattcatacactggaacacttgttt
gccggttttattcgtcagcatttaaatggcgatggggtcgaaattatcgatgtgtcaccc
atgggttgccgcaccggcttctacatgagcttgattggtgaaccggacgagcaacgagtt
gcccaggcctggttagcggcaatgcaagacgtgttggcggtaaaaaccgaagcggatatc
ccggaattaaatgtgtatcagtgcggcacctgcaccatgcattctttggatgaagcaaaa
gccattgcgcaagcaataattgatcaaaacatcggtgttatgaaaaatgaagatttactg
ctatcggccgatcaattacgcgagctaggcaacgccgtatga
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