Teleopsis dalmanni (Malaysian stalk-eyed fly): 119662383
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Entry
119662383 CDS
T09311
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
tda
Teleopsis dalmanni (Malaysian stalk-eyed fly)
Pathway
tda03022
Basal transcription factors
tda03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tda00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119662383
09124 Replication and repair
03420 Nucleotide excision repair
119662383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tda03021
]
119662383
03400 DNA repair and recombination proteins [BR:
tda03400
]
119662383
Transcription machinery [BR:
tda03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119662383
DNA repair and recombination proteins [BR:
tda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119662383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
IBR
Motif
Other DBs
NCBI-GeneID:
119662383
NCBI-ProteinID:
XP_037927915
LinkDB
All DBs
Position
X:complement(29572790..29574507)
Genome browser
AA seq
416 aa
AA seq
DB search
MADEFREEETKEYRWETGYEKTWEAIKEDDDGQLDTVIAEIILKAKRKRQTEKVKRNRLG
IMRHMFLIIDCSESMSVPDLKPSRMTCTRKLLEIFIEEYFDQNPISQLGIILLRGKRAEK
VTELSGTAKTHLKGLEILNKITPTGEPSLQNGLEMGWKHLKLLPSHASREILLIMSSLTT
CDPSDINVTIEALKQDRIRCSVISLSAEVRLCRYLTQQTNGTLGAVLDDSHYRELLLAHI
DPPPAAQTQVNSLIKMGFPSAGEDDSIKPPLSMCVCHLDSTDEPSKLTTEGYFCPKCSSK
YCELPVECKTCGLTLVSAPHLARSYHHLFPVKHYIESPNTGIVKMCFSCRKVFTKKDLNV
YLCEACEQYYCVDCDIFIHDNMHTCPGCTTIPTIAKQTYARQPQMPSTGKMPSSSQ
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgaatttcgtgaagaggagaccaaagaatatcgctgggaaactggctatgag
aaaacttgggaagctatcaaagaggatgatgatgggcagttggatactgttattgctgaa
attatactcaaagcaaaacgtaagcgacaaacagaaaaagtcaagcgcaatcgcttgggt
attatgcgccatatgtttttgataattgattgctcagaatcgatgtctgtgccagaccta
aaaccttccagaatgacttgtacacgcaaacttttggaaatttttattgaagaatatttt
gatcaaaatcctataagtcaattgggcatcattttgttacgcggcaaacgtgcagagaaa
gtaacagaattatccggaacagcaaaaacacacttgaaaggtttagaaattttaaataaa
ataactccaacaggtgaaccgtccttacagaacggccttgaaatgggctggaaacatttg
aaacttttaccatcgcatgcatcacgtgaaattttacttattatgagctcattaacaact
tgtgatccatctgatataaatgttaccatagaagcattaaaacaagatcgtattagatgc
tcggttatctcattatcggccgaagttcgtctctgtcgttatttgacacaacaaacaaat
ggtacactgggagcggtattagacgattcacattatcgtgagctgctattggcgcatatt
gatccaccaccagcggcacaaacacaagtaaattcattgattaaaatgggtttcccaagt
gctggagaagatgatagtattaagcctccattatctatgtgcgtatgccatttggatagc
actgatgaacccagtaaattaacaacagagggttacttctgtccaaaatgctcaagtaaa
tattgtgaattgccagttgaatgtaaaacatgtggcctaacattggtatccgcgccccac
ttagcacgttcgtatcatcatctatttccagttaaacattacatagagtcacccaacact
ggaattgtgaaaatgtgctttagttgtcgtaaggtttttacaaaaaaggatctaaatgta
tacctttgcgaggcatgtgaacaatattactgcgtcgattgtgatatttttatacatgac
aacatgcacacttgtcctggttgcacaactataccaaccatcgctaagcaaacatatgct
cggcaaccacaaatgccgagcacagggaaaatgccaagcagttcccaatga
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